Gene CHU_0044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0044 
Symbol 
ID4186965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp56692 
End bp57063 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content33% 
IMG OID638070043 
Producthypothetical protein 
Protein accessionYP_676679 
Protein GI110636471 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0000012683 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000519715 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAAAGTC ACAAAAAATA CGAGAAGAAA TATTTTCAGA TTCGAGTAAT TGGTCAGAAT 
GATACTGGAA AATCTGAGTT GAAAACTCTT CACTTATTGG CAGTAGATTA CGCACAAGCA
ATGAGCTTGG CGAGATGGCA TCTTCATTTC GAATATCAAT GTTTTCAAGC ATTCTTATTG
CAGTATCGCT TTTTGAAGAT TGCCTTATTT CAATACTATA GTCAATTACA AGGTTATGAG
ATCAGCAGAT TTCATGTGAT CGCTTGTCTT TATGTATTCA AGATGGATAA TAGATTTGAT
GAAGATGTTT CATTGCTTAT TCTGGCTGAA GCTCGCAAGC TTATTGTAAA TTATCTAAGA
AATAAAAAAT AA
 
Protein sequence
MQSHKKYEKK YFQIRVIGQN DTGKSELKTL HLLAVDYAQA MSLARWHLHF EYQCFQAFLL 
QYRFLKIALF QYYSQLQGYE ISRFHVIACL YVFKMDNRFD EDVSLLILAE ARKLIVNYLR
NKK