Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0043 |
Symbol | |
ID | 4186964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 55650 |
End bp | 56270 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 638070041 |
Product | hypothetical protein |
Protein accession | YP_676677 |
Protein GI | 110636470 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000000262886 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000528735 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCGTTCAA AAAGTGAAAT CTTATTGGCG ATTAAACAAC AGTTAGAATT TGTTAAAGAT AATCTTCACG ATTTAAAAAA TAATCCCAAT GATGCTAAAA TTAAAAGGCA GTCATTCGCA AATCTTATCA CATGGGGCAG AACTGTTACT TTTGTTATAC AAAATCTTAA AAGTGTTGTC GGTGAAGATA AATTTAATAC TTGGTATCAG CCTTTTCAAG ATGAGATGAA AAATGATCAA TTATTAAATA TGTTTAAAGA TGCGAGGAAT AATTTAGAAA AGCAGGGCAA GCTTCATACG TCATCGATAG GTTTACGAAA TTTTTCTTTT GATACAAGTA TGCTCAATAA TTTCCAACCA CCACCTAATA ACAAAGGTTT TTTTATAGGC GATCAATTTG GGGGGAGTGG ATGGATTATT GAATTGCCAG ACGGAAGCAC AGAAAAAATA TATGTTGATA TGGCTGATAT ACAGACATGG ACTATTGAAA TTTCATTCTC TAATCATGCA GTCATGCATT TAGGGCAAAC AGTAACAGAC ACAAGCATAG AAAATTGTTC TTCATTATAT TATGATTATT TAAAAGGTTT AGTCGAGAAA ACTACATTAG AATTTAAATA G
|
Protein sequence | MRSKSEILLA IKQQLEFVKD NLHDLKNNPN DAKIKRQSFA NLITWGRTVT FVIQNLKSVV GEDKFNTWYQ PFQDEMKNDQ LLNMFKDARN NLEKQGKLHT SSIGLRNFSF DTSMLNNFQP PPNNKGFFIG DQFGGSGWII ELPDGSTEKI YVDMADIQTW TIEISFSNHA VMHLGQTVTD TSIENCSSLY YDYLKGLVEK TTLEFK
|
| |