Gene CHU_0039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0039 
Symbol 
ID4183688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp49986 
End bp50528 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content24% 
IMG OID638070037 
Producthypothetical protein 
Protein accessionYP_676673 
Protein GI110636466 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000000375731 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000452923 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAGTTAT TTAGCGAAAT AGAAGATGTA ATAGTAGAAG AAATAAAAAA AGTCTTTGAA 
TTGGATTATT TTTCAATTGG TACAGTTCAA TTTGGAGGGA TTATAATTGT TTGCATGGTT
AAATTCAAAG ATGAAACTAA ATTAAATAGC CAATGGAAAG AATTCAACAG CTACTTAACA
GCTAAATTCA TACCTACAGT AAAAGATGAT TATTCAAAAT GGAATTTTTA TGTATTTTAT
TTTTCAAATA ATATAGTTAA TAAGTCCCTG AAATATGAAA TTGAAAATAA CAAATTTAGC
AGTAGGAAAA TTGTAATTGA TAATTGCGAA TCAATTACTG CAACAGAAAT AAATAATGTG
ATATCAGAAC ACATTACAAA CGACAAAATT CAAATTAATG TTGAAAATAA AGAAATATCA
ACATTTAACA AGAATGCTTC TCTAGCAAAT ATTTTAGATA AGTTAAGCTT AAGTAAAAAA
AATGATGAAG ATATGCAAAA TGCATTGGGT CAAATAGAAA ATATTTTTAA AGATGAAATT
TAA
 
Protein sequence
MELFSEIEDV IVEEIKKVFE LDYFSIGTVQ FGGIIIVCMV KFKDETKLNS QWKEFNSYLT 
AKFIPTVKDD YSKWNFYVFY FSNNIVNKSL KYEIENNKFS SRKIVIDNCE SITATEINNV
ISEHITNDKI QINVENKEIS TFNKNASLAN ILDKLSLSKK NDEDMQNALG QIENIFKDEI