Gene CHU_0038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0038 
Symbol 
ID4183687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp48710 
End bp49999 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content30% 
IMG OID638070036 
Producthypothetical protein 
Protein accessionYP_676672 
Protein GI110636465 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000139446 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000596496 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGAGAC TAGATTTATT ACCCAAATAT ATAGTAAGGG TCGAAGGAGC TAGTGGCTGC 
TTGTTCCAGC CAATAAATGA TGAATATAGC TGCGTTCTAA CAGCAAAGCA TGTTATTGAT
GGTAATAATT CACCATCAAT AATCCGCCAG GCTTTTGATG AAAATGGTGC GTTAGTAAAT
GAAACATTAG AAATTATTGG GACTCCATTT TTACATTCTA ACGAACACAA GGATGCCGCA
ATTATAAAGA TTAAGAAAGT AGAAGGAATT GATTCTTTAC TACGAGACGA TTTATCATCT
GAAAACAGAG ATGGATATTA TTTGTGTGGA CATCCAGAGT CTAGAAGAAC TCAAAATGAT
AGTTTTAGAC TTGATGAAAT TAGCATTCTA CAACCCAAGG AAAATAATTA TAGAGAAGCT
AAAAGTAAAC AACCTATTAT TTATAATGAG GTAACTGGAC AATCTGGAGG GGGTATTTTA
AAAACACATG AATCTTGCAT TTTGATTTCA GGTATCCAAT CAAGAATGGT AGCAGAAGAT
GAAAGAGAAA CATTGGGAAG ATTAGCATTA ATGCCTTTAT CATTCTTTGA TGAAATCGTA
GAGCAAAATC CAAAAGAATT ATCTGCATTA TTTCCGCCAT ACATTGCTTC ATTCAAAAGA
TTAGTTGATG AAATATTCCC GCTTTCAGGA ATTCAGGTTG CTGATCAGAA AAAAAAATTA
ATTCAAAATG AATTAAAGGT AATTGCAAAA AATCTTTGTG ATGATTTTAC TCCTCAATTA
TTAATTGATT TGTATAAAGA TTCTTTACTT GTTTCTGGAA CAGATAAAAG TGTAATTAAT
CATAGTGAGT TATGGGTTTC ATTTTTAGAA TTACTTTCAA TAAATCAATT ACATAGTGAG
CAAAAAATTA CATTAGATTT ATTAAAGCAA ATTCATAAAT CTAAAAAATT ATACTTTACA
GATTCGAAAG AATGGATTTC CAAATTAGAA GACATATATA GGTCTGATTT ATCGGAAATA
GAAAAAGGAG GTCTTGTTGT TGTTGGTTCT ACAATCGACA AAAAACCTAC AACAGTAGAA
ATTGATAAAG GGTATATAGG TAATATTTGT ACAGTTCCAA GTAGTGAAAT GAATATTAGT
AATACTGTCA GCGACCCTTT TAATGATTTA TCGATAGTTC ATATTTACAA ATTTCAAAAG
CATGTAATTG ATAATTATAA AGCATTTACC TCAATCACAT CAGCCAATTC ACTTAAAACA
ATAAAAGAAG TTACAAATGG AGTTATTTAG
 
Protein sequence
MARLDLLPKY IVRVEGASGC LFQPINDEYS CVLTAKHVID GNNSPSIIRQ AFDENGALVN 
ETLEIIGTPF LHSNEHKDAA IIKIKKVEGI DSLLRDDLSS ENRDGYYLCG HPESRRTQND
SFRLDEISIL QPKENNYREA KSKQPIIYNE VTGQSGGGIL KTHESCILIS GIQSRMVAED
ERETLGRLAL MPLSFFDEIV EQNPKELSAL FPPYIASFKR LVDEIFPLSG IQVADQKKKL
IQNELKVIAK NLCDDFTPQL LIDLYKDSLL VSGTDKSVIN HSELWVSFLE LLSINQLHSE
QKITLDLLKQ IHKSKKLYFT DSKEWISKLE DIYRSDLSEI EKGGLVVVGS TIDKKPTTVE
IDKGYIGNIC TVPSSEMNIS NTVSDPFNDL SIVHIYKFQK HVIDNYKAFT SITSANSLKT
IKEVTNGVI