| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0036 |
|---|
| Symbol | coiA |
|---|
| ID | 4183685 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 46660 |
|---|
| End bp | 47610 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 638070034 |
|---|
| Product | competence protein; transcription factor |
|---|
| Protein accession | YP_676670 |
|---|
| Protein GI | 110636463 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4469] Competence protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000000268846 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.000497886 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGATCCACG CTAAAAACGT ACAAGGACAA AAAATTAAAG TTTCTTTTTC AGGAGAAAAG
GCAAAGTGCA TTGATTGTGG ACAAGATGTA CGTGGACATA AAGGGAGAAT GAAAATACCA
TACTGGCAGC ATTTAAATAA AAAGGACTGC GATGCTTGGT TTGAACCAAT TACCAGATGG
CATATTGATT GGCAGAATAA ATTTCCAAAA GAATTTCAAG AAGTAAGTTT AATAGATCCT
AACACAAAAG AATTTCATAG AGCTGATGTT AGAACAAATT CTGGATTAGT CATAGAGGTC
CAACATTCTC CCATAAAACC CGATGAGATT GAGCAAAGAG AAAATTTTTA TGGAAAAAAT
AAATTATTGT GGATTTTAAA TGGTGAAAGT CTATTAAAGC ATTGTAGACT AAATTATCGC
TATGAAAAAA AGGAAATGTC ATTATCGTTT GAAATACCTC ATTACTTAGA TAAATCCCCT
GAATTTAATT TTCAAGCTTT CAATGAGTAT TTTTTGAAAA GTCAAGCATT AAATAAAATT
AGAATCCATC CTGATTTATT AGATTTTGAA AATCAGAATG GAAATTATTT TTTATTTCAT
TTCAATAATA GCGTGTCATT TGAATCTATA AAATATGAAC TAATTTATGA TGCCAGAAAA
ATTTTAAATA TTTTATTGAA TGAAAAATTT CATGAAGATT ACTTGAACGA GTTTAAAATT
AATTATACAG ACATACCGCA AGACAGATTT AGAAACATTA ATCTTATAAA AAAATATTGG
AGACCTTTTA TTGATTTGAT GAAACACCCT GTTTTTATTG ACAATCTGGA AGGTATTGAA
ACTGACAAGA TATATTTTTA TCAGAAAAAT GAAATTATTG ATAAAGATGA ATTTATTAAG
AATATTGAAA AAAGCTGGTT GGCTGGTTAT AATAAGAAGC ATTTATTATA A
|
|---|
| Protein sequence | MIHAKNVQGQ KIKVSFSGEK AKCIDCGQDV RGHKGRMKIP YWQHLNKKDC DAWFEPITRW
HIDWQNKFPK EFQEVSLIDP NTKEFHRADV RTNSGLVIEV QHSPIKPDEI EQRENFYGKN
KLLWILNGES LLKHCRLNYR YEKKEMSLSF EIPHYLDKSP EFNFQAFNEY FLKSQALNKI
RIHPDLLDFE NQNGNYFLFH FNNSVSFESI KYELIYDARK ILNILLNEKF HEDYLNEFKI
NYTDIPQDRF RNINLIKKYW RPFIDLMKHP VFIDNLEGIE TDKIYFYQKN EIIDKDEFIK
NIEKSWLAGY NKKHLL
|
|---|
| |