Gene CHU_0028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0028 
SymbolruvA 
ID4183677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp31846 
End bp32445 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content38% 
IMG OID638070026 
ProductHolliday junction DNA helicase 
Protein accessionYP_676662 
Protein GI110636455 
COG category[L] Replication, recombination and repair 
COG ID[COG0632] Holliday junction resolvasome, DNA-binding subunit 
TIGRFAM ID[TIGR00084] Holliday junction DNA helicase, RuvA subunit 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.591728 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCCT ACATAGAAGG AAAATTAGCA CACAAAGACC CTACGTTTGT AGTCGTAGAT 
GTTCAGGGAA TCGGATATCA CATACGGGTT TCATTACATA CTTTTTCCCA GCTGAAGGAT
TTAGAACGTG TAAAAATACA CACCTTTTTA CATATCAAAG AAGATGCGCA TACACTATTC
GGTTTTGCAG ATTTAATGGA AAAGGAGATG TTCTTACATC TTACATCCAT TAGCGGCATT
GGTCCCGGAA CAGCACTGGT TGTATTGTCT TCCATGAACC CCATAGAATT AAAAGAAGCA
ATTGCGCGGG AAGATGTGAA AACGATTCAA TCTGTTAAAG GTATCGGTTT AAAAACAGCA
CAGCGTGTAA TTCTGGAACT GAAGGATAAG ATGAAAAAGG ATGCCCTTTT AGCCGGTTCA
GATTCAAAAC AGAATTTTTC AGTATCGCAC AATAGTATCC GTTCTGAGGC GTTAACAGCA
TTGATTACGC TAGGATTTAC AAAAACTGTG GCTGAAAAGA ACCTGGATCT TATTTTAAAA
GGCAACTCAA ATTCATTTAC GCTTGAAGAT TTGATCAAGC AAGCTTTAAA AATGTCTTAA
 
Protein sequence
MIAYIEGKLA HKDPTFVVVD VQGIGYHIRV SLHTFSQLKD LERVKIHTFL HIKEDAHTLF 
GFADLMEKEM FLHLTSISGI GPGTALVVLS SMNPIELKEA IAREDVKTIQ SVKGIGLKTA
QRVILELKDK MKKDALLAGS DSKQNFSVSH NSIRSEALTA LITLGFTKTV AEKNLDLILK
GNSNSFTLED LIKQALKMS