Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0028 |
Symbol | ruvA |
ID | 4183677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 31846 |
End bp | 32445 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638070026 |
Product | Holliday junction DNA helicase |
Protein accession | YP_676662 |
Protein GI | 110636455 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0632] Holliday junction resolvasome, DNA-binding subunit |
TIGRFAM ID | [TIGR00084] Holliday junction DNA helicase, RuvA subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.591728 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGCCT ACATAGAAGG AAAATTAGCA CACAAAGACC CTACGTTTGT AGTCGTAGAT GTTCAGGGAA TCGGATATCA CATACGGGTT TCATTACATA CTTTTTCCCA GCTGAAGGAT TTAGAACGTG TAAAAATACA CACCTTTTTA CATATCAAAG AAGATGCGCA TACACTATTC GGTTTTGCAG ATTTAATGGA AAAGGAGATG TTCTTACATC TTACATCCAT TAGCGGCATT GGTCCCGGAA CAGCACTGGT TGTATTGTCT TCCATGAACC CCATAGAATT AAAAGAAGCA ATTGCGCGGG AAGATGTGAA AACGATTCAA TCTGTTAAAG GTATCGGTTT AAAAACAGCA CAGCGTGTAA TTCTGGAACT GAAGGATAAG ATGAAAAAGG ATGCCCTTTT AGCCGGTTCA GATTCAAAAC AGAATTTTTC AGTATCGCAC AATAGTATCC GTTCTGAGGC GTTAACAGCA TTGATTACGC TAGGATTTAC AAAAACTGTG GCTGAAAAGA ACCTGGATCT TATTTTAAAA GGCAACTCAA ATTCATTTAC GCTTGAAGAT TTGATCAAGC AAGCTTTAAA AATGTCTTAA
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Protein sequence | MIAYIEGKLA HKDPTFVVVD VQGIGYHIRV SLHTFSQLKD LERVKIHTFL HIKEDAHTLF GFADLMEKEM FLHLTSISGI GPGTALVVLS SMNPIELKEA IAREDVKTIQ SVKGIGLKTA QRVILELKDK MKKDALLAGS DSKQNFSVSH NSIRSEALTA LITLGFTKTV AEKNLDLILK GNSNSFTLED LIKQALKMS
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