Gene CHU_0024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0024 
SymboltatA 
ID4183673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp26398 
End bp26613 
Gene Length216 bp 
Protein Length71 aa 
Translation table11 
GC content36% 
IMG OID638070022 
Productsec-independent protein translocase 
Protein accessionYP_676658 
Protein GI110636451 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1826] Sec-independent protein secretion pathway components 
TIGRFAM ID[TIGR01411] twin arginine-targeting protein translocase, TatA/E family 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTTAA CTATTTGTAA AATGCTATTT CTGCAAGGAA TAGGCATGCC GGAGATTATA 
TTAATCTTAT TGCTTGTTGT CTTTCTTTTT GGGGCTAAAA AAATTCCTGA TTTGGCTCGT
GGCTTAGGTC GTGGTATCCG TGAATTTAAG GATGCAAGTA AAGAAGTGAA AAAGGAAATT
GAAGACGGTC TTAAAGACGA CACAAAAAAC GCATAA
 
Protein sequence
MMLTICKMLF LQGIGMPEII LILLLVVFLF GAKKIPDLAR GLGRGIREFK DASKEVKKEI 
EDGLKDDTKN A