Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0023 |
Symbol | yibP |
ID | 4183672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 25073 |
End bp | 26311 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638070021 |
Product | M23/M37 family peptidase |
Protein accession | YP_676657 |
Protein GI | 110636450 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG4942] Membrane-bound metallopeptidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.257571 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTCCAAA AAAATTCAAT GAAAAATAAG CTTAAATATA TTGCCGTAGT TGGGTTACTT TTTATTGTAA TCACGTCTAC GCTTGCTCAA AAGAAAAGCC GTAAGGAGCT TGAAAAAGAG CGCGAGCGGA ATCTGAAGAA AATAAAAGAA ACAACAAAAG TACTGGAAGA AACGAAGCAG CAAAAAAATG CTACGTTAAG CCAGCTTACC TTGTTGAATC AGGAAATTGA AGAGCGCGAA GTAGTCATAA ATTCAATGTC TACGGAAGTG AGTTTGCTGG AGCGGGAAAT AAAGGAACAG GAGATGATTA TCCGTGCGCT GGAAGAAGAT ATAAAAGGAT TGAAAGAAGA GTATGCACAG TTAATATACC TTGGTTACAA GCACCTGAAC GGCTACGACA AACTCATTCA TATTTTATCA GCCGATAACA TTGCACAGAT GCTTCGCCGC AACAGCTATT TCAAGCAGTA TGCACATGCA CGTACGTATC AATTAGAAGA AATCGAAAGT GTAGCTAAAG CGTTAAAAAC GTATGAGCGT ATGTTGGCGG GCAAGCAGGA AGAAAAAACC GGTTTATTGC AAGCCAAAAC GATTGAAACA AAAAATTTAA CGAATACAAA AAATCAACAG AGTACAGTTC TGCGTCAATT GTCATCAAAA GAAAAAGAAC TGAAAAAAGA TCTGGATGAA TCTCAAAAAT CAGTTGATAA ACTTCAAAAG CTAATCACCG ATTTAATTGC TGCCGAACGA AAAAAAGCAT TGGATAAAGC CAAAAGTTCC AGTTCAACGG CTAATAAGGC AACGATCGAA AAAAATGTAA AGCTATCAAG CAATTTTGAA GGCAATATGG GGCAATTACC CTGGCCGGTT CAGAATGGAA GAGTTTCCAA TCATTTTGGC CGTCAGGCAC ACCCGGTACT CAAAGGCGTT TTCGTAGATA ATTTAGGCGT AGATATTTTA ACGGTTCAAA ATGAGCAGGT TAAAGCTGTT TTTGGAGGGA AGGTCATTAC TGTGGCAGAA GTACCGGGCA TGCACAAAAT TGTTATGGTG CAGCATGGGG AATATTTTAC GGTATATGCC AAATTAAGAG ATGTCAGTGT TTCAACAGGT GAAGAAATCA CAGTAAAACA AGTGATTGGC TCTGTTTATA CCGGTAAAGA TGGTGAAAGT GAGCTACAGT TTCAGATCTG GAAAAACGAA ACCAAATTAA ATCCTGAAAT CTGGCTCAGA AAGCGATAA
|
Protein sequence | MFQKNSMKNK LKYIAVVGLL FIVITSTLAQ KKSRKELEKE RERNLKKIKE TTKVLEETKQ QKNATLSQLT LLNQEIEERE VVINSMSTEV SLLEREIKEQ EMIIRALEED IKGLKEEYAQ LIYLGYKHLN GYDKLIHILS ADNIAQMLRR NSYFKQYAHA RTYQLEEIES VAKALKTYER MLAGKQEEKT GLLQAKTIET KNLTNTKNQQ STVLRQLSSK EKELKKDLDE SQKSVDKLQK LITDLIAAER KKALDKAKSS SSTANKATIE KNVKLSSNFE GNMGQLPWPV QNGRVSNHFG RQAHPVLKGV FVDNLGVDIL TVQNEQVKAV FGGKVITVAE VPGMHKIVMV QHGEYFTVYA KLRDVSVSTG EEITVKQVIG SVYTGKDGES ELQFQIWKNE TKLNPEIWLR KR
|
| |