Gene CHU_0023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0023 
SymbolyibP 
ID4183672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp25073 
End bp26311 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content38% 
IMG OID638070021 
ProductM23/M37 family peptidase 
Protein accessionYP_676657 
Protein GI110636450 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG4942] Membrane-bound metallopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.257571 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCAAA AAAATTCAAT GAAAAATAAG CTTAAATATA TTGCCGTAGT TGGGTTACTT 
TTTATTGTAA TCACGTCTAC GCTTGCTCAA AAGAAAAGCC GTAAGGAGCT TGAAAAAGAG
CGCGAGCGGA ATCTGAAGAA AATAAAAGAA ACAACAAAAG TACTGGAAGA AACGAAGCAG
CAAAAAAATG CTACGTTAAG CCAGCTTACC TTGTTGAATC AGGAAATTGA AGAGCGCGAA
GTAGTCATAA ATTCAATGTC TACGGAAGTG AGTTTGCTGG AGCGGGAAAT AAAGGAACAG
GAGATGATTA TCCGTGCGCT GGAAGAAGAT ATAAAAGGAT TGAAAGAAGA GTATGCACAG
TTAATATACC TTGGTTACAA GCACCTGAAC GGCTACGACA AACTCATTCA TATTTTATCA
GCCGATAACA TTGCACAGAT GCTTCGCCGC AACAGCTATT TCAAGCAGTA TGCACATGCA
CGTACGTATC AATTAGAAGA AATCGAAAGT GTAGCTAAAG CGTTAAAAAC GTATGAGCGT
ATGTTGGCGG GCAAGCAGGA AGAAAAAACC GGTTTATTGC AAGCCAAAAC GATTGAAACA
AAAAATTTAA CGAATACAAA AAATCAACAG AGTACAGTTC TGCGTCAATT GTCATCAAAA
GAAAAAGAAC TGAAAAAAGA TCTGGATGAA TCTCAAAAAT CAGTTGATAA ACTTCAAAAG
CTAATCACCG ATTTAATTGC TGCCGAACGA AAAAAAGCAT TGGATAAAGC CAAAAGTTCC
AGTTCAACGG CTAATAAGGC AACGATCGAA AAAAATGTAA AGCTATCAAG CAATTTTGAA
GGCAATATGG GGCAATTACC CTGGCCGGTT CAGAATGGAA GAGTTTCCAA TCATTTTGGC
CGTCAGGCAC ACCCGGTACT CAAAGGCGTT TTCGTAGATA ATTTAGGCGT AGATATTTTA
ACGGTTCAAA ATGAGCAGGT TAAAGCTGTT TTTGGAGGGA AGGTCATTAC TGTGGCAGAA
GTACCGGGCA TGCACAAAAT TGTTATGGTG CAGCATGGGG AATATTTTAC GGTATATGCC
AAATTAAGAG ATGTCAGTGT TTCAACAGGT GAAGAAATCA CAGTAAAACA AGTGATTGGC
TCTGTTTATA CCGGTAAAGA TGGTGAAAGT GAGCTACAGT TTCAGATCTG GAAAAACGAA
ACCAAATTAA ATCCTGAAAT CTGGCTCAGA AAGCGATAA
 
Protein sequence
MFQKNSMKNK LKYIAVVGLL FIVITSTLAQ KKSRKELEKE RERNLKKIKE TTKVLEETKQ 
QKNATLSQLT LLNQEIEERE VVINSMSTEV SLLEREIKEQ EMIIRALEED IKGLKEEYAQ
LIYLGYKHLN GYDKLIHILS ADNIAQMLRR NSYFKQYAHA RTYQLEEIES VAKALKTYER
MLAGKQEEKT GLLQAKTIET KNLTNTKNQQ STVLRQLSSK EKELKKDLDE SQKSVDKLQK
LITDLIAAER KKALDKAKSS SSTANKATIE KNVKLSSNFE GNMGQLPWPV QNGRVSNHFG
RQAHPVLKGV FVDNLGVDIL TVQNEQVKAV FGGKVITVAE VPGMHKIVMV QHGEYFTVYA
KLRDVSVSTG EEITVKQVIG SVYTGKDGES ELQFQIWKNE TKLNPEIWLR KR