Gene CHU_0017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0017 
SymbolpaaG 
ID4186898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp18701 
End bp19486 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content45% 
IMG OID638070015 
Productenoyl-CoA hydratase 
Protein accessionYP_676651 
Protein GI110636444 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATA ATTTATCTCT GCTAGTCGTT CGTGAAGACG CTGGTATTCT TATTATAACA 
GTAAACCGTC CTGATAAATT AAATTCCTTA AATAGAGCCG TGCTGCAGGC AATCGATGAA
CAAATCGAAT ACGCTTATAC ATCTCCATCC GTTAAGGGAA TTATTATTAC AGGATCCGGG
GAGAAAGCAT TTGCAGCCGG AGCTGACATC AGCGAATTCT CTTCGTTACA GCCGCACGAA
GCACAATTGC TTTCGAAAGA AGGTCAGTTA ATATTTGAAA AAATTGACAT GTTAACCAAA
CCTGTCATTG CTGCCGTAAA TGGTTTTGCA TTAGGCGGCG GGTTTGAGCT TGCATTGGCA
TGCCACATTC GCATGGCTTC TGAAAATGCC TTATTCGGAT TACCTGAAGC TACGCTGGGC
CTGTTGCCCG GTTATGGAGG CACACAGCGC TTGCCGCAAA TAATCGGTAA AGGACGTGCA
ATAGAAGTGA TGCTTTCCGC TGATAAGATT CCTGCTCCGA AAGCACTGGA ATGGGGAATC
GTAAATGCGG TTACTACACA GGCAGCCCTT ATCCCTTCTG CAATCGCGCT ACTTAATAAA
TTCTTTTCAA AGGCACCAAC ATCTATTGCA GAAGTGCTGC GCTGTACACA CCTTTCAATG
GAAACTTCCG GAACAGCCTT TGATCAGGAA GCGAAATCAT TTGGACGTTG CGCCGGTACG
CAGGATTTTA AAGAAGGCGT ACAGGCATTC CTGGAAAAAC GCCCCGCTAC ATTTACCGGA
AAATAA
 
Protein sequence
MSDNLSLLVV REDAGILIIT VNRPDKLNSL NRAVLQAIDE QIEYAYTSPS VKGIIITGSG 
EKAFAAGADI SEFSSLQPHE AQLLSKEGQL IFEKIDMLTK PVIAAVNGFA LGGGFELALA
CHIRMASENA LFGLPEATLG LLPGYGGTQR LPQIIGKGRA IEVMLSADKI PAPKALEWGI
VNAVTTQAAL IPSAIALLNK FFSKAPTSIA EVLRCTHLSM ETSGTAFDQE AKSFGRCAGT
QDFKEGVQAF LEKRPATFTG K