| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0015 |
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| Symbol | |
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| ID | 4186896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 17018 |
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| End bp | 17812 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638070013 |
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| Product | rhomboid family membrane protein |
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| Protein accession | YP_676649 |
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| Protein GI | 110636442 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAAT TAACTCCATT CGTTCAAAGA CTTTTGATCA TCAATGTGGT CTTGTTTGCG
CTGTCGTATA TATTCGATAA CCAGCTGCAT CTGTATCATT ATCTGATTCT CCATGGTGTA
TATGCCGAAG GTTTTGCTGC TTACCAGATT GTGACGAATA TATTCATGCA TGCAGATTTC
AGACATTTGT TCGGGAATAT GCTGGGCCTG TATTTTTTCG GACCGTTGCT GGAGCATTTT
CTCGGATTTA AAAAATTCCT GATTTTATAT TTTGTATGCG GAGTTGGTGC AGGATTGTTA
TACTGGGGAA TAAATGCATA TCAGGTGCGT CTGGTGCGTG AAGATGCTAT TGCCTTTTTA
AATAGCCCGA ATCCCGATTC ATTTAATCAG TTTGTAGATA AACACAATTC GCACGAATAT
AATAATCAGC TTAATTTAAT TGATGCCTAT GCCGAACACC CTGAAGATCC GGAATTACAG
CAGCAAACCA AACACCAGGT GGTGCAGGTA GTGTATGATG TAACGAATTT CGGATTGCTT
GGTGCTTCAG GCGCTATCTT CGGTATATTA ATGGCTTTTG CCTTATTGTT TCCCAATACA
GAATTAATGC TGTTGTTTTT ACCCGTACCC ATAAAAGCCA AGTATCTGGT TGGCGTATAT
GCCGCCATTG AAATATATTC CTTATATGCA AATCGCCCGA ATGACAATGT TGCGCATTTT
GTTCATATAG CGGGTATGAT CTTCGCATTT ATTCTTATCA GGTATTGGAA GACTAACAGA
AATTCATTTT ATTAG
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| Protein sequence | MNQLTPFVQR LLIINVVLFA LSYIFDNQLH LYHYLILHGV YAEGFAAYQI VTNIFMHADF
RHLFGNMLGL YFFGPLLEHF LGFKKFLILY FVCGVGAGLL YWGINAYQVR LVREDAIAFL
NSPNPDSFNQ FVDKHNSHEY NNQLNLIDAY AEHPEDPELQ QQTKHQVVQV VYDVTNFGLL
GASGAIFGIL MAFALLFPNT ELMLLFLPVP IKAKYLVGVY AAIEIYSLYA NRPNDNVAHF
VHIAGMIFAF ILIRYWKTNR NSFY
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