Gene CHU_0011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0011 
Symbol 
ID4186892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp9942 
End bp10571 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content38% 
IMG OID638070009 
Productfatty acid hydroxylase 
Protein accessionYP_676645 
Protein GI110636438 
COG category[I] Lipid transport and metabolism 
COG ID[COG3000] Sterol desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCAGC AAGCTGAAAA AATCAAACCA AAAAATAGCG GAACAAAAAA GGTGTTTGAT 
AACCCGATTC TTGAGCGTTT AACCCGTACG CATATTTCGG TTCCGATTAC TATTTTAATG
ACCATTGCTG CCGGCTTATT GTACGTAGCT TTTGTTTATA CCGATTATAC GCAGTTAACG
CCAATGTTTG TGATCGGATT ATTCATCTCC GGATTTTTCT CCTTTACGTT ATTGGAATAC
ATCGCACACA GATATTTATT TCATATGAAG CCTACCAACG AATTCAAACG TAAGGTTCAA
TATGCACTTC ATGGTTTACA CCACGAATAT CCAAAAGACA AAGACCGTTT GGCCATGCCG
CCGATCATGA GCTTTTTGCT TGCAATCGTC TTCTTCGGTA TTTTCTATGC CATGATGAAT
ACAAAAGTAT TCGGTTTTCT TCCCGGCTTT ATTACTGGCT ATTGTGCATA CATCTTTGTT
CATTTTATTG TACATGCTTA TAACCCGCCT AAGAATTTCT TCAAGCACTT GTGGTTAAAC
CATGCCATTC ATCATTACAA AGACAATACA CAGATCTTTG GAGTATCTTC CCAGCTTTGG
GATTATGTGT TTGGAACGAT AAAAAAATAA
 
Protein sequence
MDQQAEKIKP KNSGTKKVFD NPILERLTRT HISVPITILM TIAAGLLYVA FVYTDYTQLT 
PMFVIGLFIS GFFSFTLLEY IAHRYLFHMK PTNEFKRKVQ YALHGLHHEY PKDKDRLAMP
PIMSFLLAIV FFGIFYAMMN TKVFGFLPGF ITGYCAYIFV HFIVHAYNPP KNFFKHLWLN
HAIHHYKDNT QIFGVSSQLW DYVFGTIKK