Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0011 |
Symbol | |
ID | 4186892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 9942 |
End bp | 10571 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638070009 |
Product | fatty acid hydroxylase |
Protein accession | YP_676645 |
Protein GI | 110636438 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3000] Sterol desaturase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCAGC AAGCTGAAAA AATCAAACCA AAAAATAGCG GAACAAAAAA GGTGTTTGAT AACCCGATTC TTGAGCGTTT AACCCGTACG CATATTTCGG TTCCGATTAC TATTTTAATG ACCATTGCTG CCGGCTTATT GTACGTAGCT TTTGTTTATA CCGATTATAC GCAGTTAACG CCAATGTTTG TGATCGGATT ATTCATCTCC GGATTTTTCT CCTTTACGTT ATTGGAATAC ATCGCACACA GATATTTATT TCATATGAAG CCTACCAACG AATTCAAACG TAAGGTTCAA TATGCACTTC ATGGTTTACA CCACGAATAT CCAAAAGACA AAGACCGTTT GGCCATGCCG CCGATCATGA GCTTTTTGCT TGCAATCGTC TTCTTCGGTA TTTTCTATGC CATGATGAAT ACAAAAGTAT TCGGTTTTCT TCCCGGCTTT ATTACTGGCT ATTGTGCATA CATCTTTGTT CATTTTATTG TACATGCTTA TAACCCGCCT AAGAATTTCT TCAAGCACTT GTGGTTAAAC CATGCCATTC ATCATTACAA AGACAATACA CAGATCTTTG GAGTATCTTC CCAGCTTTGG GATTATGTGT TTGGAACGAT AAAAAAATAA
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Protein sequence | MDQQAEKIKP KNSGTKKVFD NPILERLTRT HISVPITILM TIAAGLLYVA FVYTDYTQLT PMFVIGLFIS GFFSFTLLEY IAHRYLFHMK PTNEFKRKVQ YALHGLHHEY PKDKDRLAMP PIMSFLLAIV FFGIFYAMMN TKVFGFLPGF ITGYCAYIFV HFIVHAYNPP KNFFKHLWLN HAIHHYKDNT QIFGVSSQLW DYVFGTIKK
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