Gene CHU_0009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0009 
SymboldnaQ 
ID4186890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp8925 
End bp9476 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content42% 
IMG OID638070007 
ProductDNA polymerase III, epsilon subunit 
Protein accessionYP_676643 
Protein GI110636436 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTTA CCGCACTGGA TTTTGAAACA GCAAACACGC ATAAAACAAG TATTTGTGCC 
GTTGGCATGG CTATTGTTGA AGACGGGAAA GTGGTTAAAA CAATTTCCAA ATTAATTAAA
CCTGTACCTG ATTTTTATAG TTACTGGAAT GTGCAGATCC ATGGCATTAC ACCTGACATG
ACGGCTGACG CACCCTATTT CATTGATGTG TGGCAGGAAT TAAAACAATA CATCGATTAC
TCAACACTTG TGGCACACAA TGCAGCTTTT GATGTGGGCG CATTGAGAAG TATACTAACC
ACACACGAAG TCTCCTTTCC TAAAACAGAT TATTTCTGTT CGTGTTCAGT AAGCCGCAAG
GTATTCAAAG AAATTGAAAA TCATAAACTG TCAACCGTAT GCCGGCACAT TGATGTGCCG
CTGAATCACC ACGAAGCAGA GAGCGATGCA ATCGGCGCGG CGCAGATTAT TATTAAAGCC
GGTGAACGCC TGGGCGCTAA TTCGATTGAA GAGCTGATGG CTATGCTGAA GATGAAACTG
AAGGTGTTTT GA
 
Protein sequence
MNFTALDFET ANTHKTSICA VGMAIVEDGK VVKTISKLIK PVPDFYSYWN VQIHGITPDM 
TADAPYFIDV WQELKQYIDY STLVAHNAAF DVGALRSILT THEVSFPKTD YFCSCSVSRK
VFKEIENHKL STVCRHIDVP LNHHEAESDA IGAAQIIIKA GERLGANSIE ELMAMLKMKL
KVF