| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0001 |
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| Symbol | |
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| ID | 4186882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 173 |
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| End bp | 850 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 638069999 |
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| Product | capsular polysaccharide biosythesis protein |
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| Protein accession | YP_676635 |
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| Protein GI | 110636428 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4464] Capsular polysaccharide biosynthesis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCATTCGC ACCTGATACC GGGCATTGAT GATGGTTCAA AAAGCATGGA AGAATCTTTA
TCATTGATTC AGGAATTTAA AAAATTAGGT TATAAAAAAA TCATTACCAC CCCGCACATC
ATGGGGGATT TTTTTAAAAA TTCGAAAGAA ACAATATTCC CGGGGCTAAT TGAATTAAGA
GCAAGTATAG CAGAAGCCGG CATTGATATT GAAATAGAAG CCGCAGCAGA ATATTATTTA
GACGAATGGT TTATAGAAAA ACTGGAACGG AATGAACCGC TGCTAAAGTT AGGGGGCAAT
TATGTTCTGT TTGAAACTTC TTACATGAAC AGGCCGACAC AACTTCATCA GGCAATTTTT
TTAATGCGTT CATTGGGTTA TATACCTGTG TTGGCACACC CTGAAAGATA TACGTATTTA
TATGAGGATT TCAAACTGTT TAAAGAAATC TATGAGATGG ATGTGCTGTT TCAGATTAAT
TTAAATTCGT TGGCTGGTTA CTATTCTAAA ACAGCTAAAC TATATGCTGA AAAATTAATT
GATAACAACA TGGTAGATTT TGTTGGCACC GATTGCCACG GACAAAGACA TATAGATGTA
CTGGCGAAAG TTAAAGTGTC AAACTATTAT CAAAAGCTTC AAAAATTAAG TATTTTAAAT
AACACATTGA TTTCATGA
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| Protein sequence | MHSHLIPGID DGSKSMEESL SLIQEFKKLG YKKIITTPHI MGDFFKNSKE TIFPGLIELR
ASIAEAGIDI EIEAAAEYYL DEWFIEKLER NEPLLKLGGN YVLFETSYMN RPTQLHQAIF
LMRSLGYIPV LAHPERYTYL YEDFKLFKEI YEMDVLFQIN LNSLAGYYSK TAKLYAEKLI
DNNMVDFVGT DCHGQRHIDV LAKVKVSNYY QKLQKLSILN NTLIS
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