| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_4089 |
|---|
| Symbol | ubiE |
|---|
| ID | 4182789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | + |
|---|
| Start bp | 4400359 |
|---|
| End bp | 4401192 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 638069985 |
|---|
| Product | ubiquinone/menaquinone biosynthesis methyltransferase |
|---|
| Protein accession | YP_676621 |
|---|
| Protein GI | 110636413 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | [TIGR01934] ubiquinone/menaquinone biosynthesis methyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCAGC AGCCGGCATT CGGTTATGGT CGCGCCGGTT TTCAAGAGCG AGAAGATATG
TCGCAACAGC GCACTACGGC TTCAGGCGGG ATGGAGACCG CCTTCGGCTA CCGAAACGTG
GGAGAAGGCG AGAAGCAGGG CCTCGTCAAC GAGGTGTTCC ATCGCGTGGC GGAACGCTAC
GACCTGATGA ATGATCTGAT GTCCGGCGGC CTGCATCGGC TCTGGAAGGC CGGGATGGTC
TCCTGGCTCT CGCCACCAAA GCAGCCTGGC TTCAAGGCGC TAGACGTGGC TGGAGGCACT
GGCGACATAG CTTTCCGCAT CGTGGAGGCT TCCGGCGGCC AAGCGCAGGT CACCGTGCTT
GATATCAACG GTTCCATGCT GGCCGTGGGC CGTGATCGGG CGGAGAAACG TGGGCTTGCT
CAGAATCTGA GCTTTGTCGA AGCCAATGCC GAGGAACTTC CCTTTCCTTC ATCGGCCTTT
GATGCATATA CGATCGCTTT CGGCATTCGC AACGTGCCGC AGATAGACAA GGCATTGTCT
GAAGCCTGCC GCGTGCTGCG GCCGGGTGGA CGTTTCCTTT GCCTGGAATT TTCGGAGGTG
GACGTGCCTC TTCTCGACAA AGTCTATGAG GCCTGGTCCT TCAACGCCAT TCCTCGCATC
GGCCAGGCCG TGGCAGGTGA TGGCGAGCCC TATCGCTACC TGGTGGAATC CATTCGGAAG
TTCCCCAATC AGGATAATTT CGCCGTCATG ATCAAGCGGG CCGGCTTCGA CCGCGTCTCC
TGGCGAAATT ATTCGGGTGG TATTGCCGCC CTCCATTCCG GCTGGAAAAT CTGA
|
|---|
| Protein sequence | MAQQPAFGYG RAGFQEREDM SQQRTTASGG METAFGYRNV GEGEKQGLVN EVFHRVAERY
DLMNDLMSGG LHRLWKAGMV SWLSPPKQPG FKALDVAGGT GDIAFRIVEA SGGQAQVTVL
DINGSMLAVG RDRAEKRGLA QNLSFVEANA EELPFPSSAF DAYTIAFGIR NVPQIDKALS
EACRVLRPGG RFLCLEFSEV DVPLLDKVYE AWSFNAIPRI GQAVAGDGEP YRYLVESIRK
FPNQDNFAVM IKRAGFDRVS WRNYSGGIAA LHSGWKI
|
|---|
| |