Gene Meso_4088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_4088 
Symbol 
ID4182788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp4399615 
End bp4400274 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content58% 
IMG OID638069984 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_676620 
Protein GI110636412 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0450] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.964314 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCCTTC GTATCAACGA CACCGCACCG GATTTCACCG CCGAGACAAC ACATGGCACC 
ATCCACTTCC ATGAATGGAT CGGCGATGGC TGGGCCGTCC TCTTCAGCCA CCCAAAGAAT
TTCACACCCG TCTGCACGAC CGAGCTTGGC GCGATGGCGG GCCTGGAAGG CGAGTTCAAG
AAGCGCAATG CCAAAATCAT CGGCATTTCG GTGGACCCCG TCCAGGATCA TCTGCGCTGG
AAGGACGACA TAGAAAAAGC AACAGGTTTC CGCGTAGATT ACCCGCTGAT CGGGGATAAG
GACCTGAGGG TTGCCAAGCT CTACGACATG CTGCCCGCTG AGGCGGGTGA TTCGTCCGAG
GGGCGCACCC CCGCTGACAA CGCGACGGTT CGCTCGGTTT ATGTCATCGG TCCCGACAAG
AAGATGAAGC TGATCCTCAC TTATCCGATG ACCACCGGCC GCAACTTCGA TGAGATCCTG
CGGGCTATCG ATTCGATCCA GCTCACCGCG AAACACCAGG TGGCTACTCC AGCCAACTGG
AAGCAGGGCG AGGACGTCAT CATCACCGCC GCGGTTTCCA ACGAGGATGC CGTCAAGCGC
TTCGGCGCTT TCGACACCAT TCTTCCCTAT TTGCGCAAAA CCAAGCAGCC AACGGCCTGA
 
Protein sequence
MGLRINDTAP DFTAETTHGT IHFHEWIGDG WAVLFSHPKN FTPVCTTELG AMAGLEGEFK 
KRNAKIIGIS VDPVQDHLRW KDDIEKATGF RVDYPLIGDK DLRVAKLYDM LPAEAGDSSE
GRTPADNATV RSVYVIGPDK KMKLILTYPM TTGRNFDEIL RAIDSIQLTA KHQVATPANW
KQGEDVIITA AVSNEDAVKR FGAFDTILPY LRKTKQPTA