| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_4086 |
|---|
| Symbol | |
|---|
| ID | 4182786 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | + |
|---|
| Start bp | 4397806 |
|---|
| End bp | 4398561 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638069982 |
|---|
| Product | 3-deoxy-manno-octulosonate cytidylyltransferase |
|---|
| Protein accession | YP_676618 |
|---|
| Protein GI | 110636410 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
|---|
| TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.985235 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCTA TAATTCTTAT CCCCGCCAGA ATGGCCTCCA CGCGTCTGCC TGGAAAGCCG
CTTGCCGACA TCGCCGGAAG AACCATGATC GCCCAGGTCG TCGCGAGAGC CCTTGAGAGC
GGCGTGGGAC GCGTTGTCGT GGCAACGGAC ACGGAGGAAG TCGCCGCAGC CGCTAGAGCC
GAAGGCGTTG AGGCTGTGAT GACGCGTGCC GATCATCAGT CCGGCTCGGA CCGCATATTC
GAGGCGTTGC AGACGATCGA TCCTGGAGCA ACGGCCGAGA TCGTGATCAA TCTTCAGGGC
GACTTGCCGA CGATCCCGCC GGAAGATATC CGCGCTGTCG TCCGTCCGCT GGAAAATGCG
GACACTGACA TAGCCACGCT TGGTGTCGAG ATTTCGGATG AAGAGGAAAA GGCCAATCCG
AACGTGGTGA AGATCGTGGG CGTGCCGGTC AAAACTGCGT CAGATGCACT GCGGCTGCGC
GCGCTCTACT TTACGCGGGC GACTGCCCCG TGGGGGGAGG GGCCACTTTT CCATCACATC
GGCATCTATG CCTATCGCCG CCGTGCGCTG GAACGATTCG TGGCGCTGCC GCCGGGAACG
CTTGAGATGC GCGAGCGGCT GGAGCAATTG CGTGCCCTGG AAGCGGGGAT GCGTATAGAG
GCCGAGATCG TCCGCTCGGT GCCGCTCGGG GTCGATACGC CTGCCGATCT TGAGCGCGCC
CGCCAACTTC TCTCCGCTAG AACCGAAAGC CGATGA
|
|---|
| Protein sequence | MTSIILIPAR MASTRLPGKP LADIAGRTMI AQVVARALES GVGRVVVATD TEEVAAAARA
EGVEAVMTRA DHQSGSDRIF EALQTIDPGA TAEIVINLQG DLPTIPPEDI RAVVRPLENA
DTDIATLGVE ISDEEEKANP NVVKIVGVPV KTASDALRLR ALYFTRATAP WGEGPLFHHI
GIYAYRRRAL ERFVALPPGT LEMRERLEQL RALEAGMRIE AEIVRSVPLG VDTPADLERA
RQLLSARTES R
|
|---|
| |