| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_4068 |
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| Symbol | |
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| ID | 4181641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | + |
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| Start bp | 4377404 |
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| End bp | 4379530 |
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| Gene Length | 2127 bp |
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| Protein Length | 708 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638069964 |
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| Product | TRAP transporter, 4TM/12TM fusion protein |
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| Protein accession | YP_676600 |
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| Protein GI | 110636392 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.173161 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACAG CCGAGAGCAG TTCTCCCCCC GCGCTGAAAC CGGAGCTTCT CGATCCCACG
CACGGCGACT TCAAGCGTAC GATCGAAGGC CGGCTTCTCA TGTGGATCGC CGTGGCCTTC
TCTGTATTTC AGATCGGTAC GGCGGCGCAT CTCATCAACC TGCCGAGCCA GATCGTCAGG
GCTTTCCACG TGGGATTTCT GCTGCTCCTC GTCTTCCCTG TCGTCGCCTC GGCGAGGAAT
GCCGGCCGTC CGGTGAAGGC GCTTGCATGG CTGTTTGCTT TCGCGGGCGT CGCCGTCGCG
CTCTATCAGT TCGTGGAATA TGAGCCGCTA ATCCTGCGTG CCGGCTATCC CACGCAGGTC
GACATCGTCG TAGGCGTGAT CGCGCTCATC ACCGTCTTCG CCGCGTCTTA TGTTCTGATG
GGGCCGCCTC TGCCCATCAT CTCCGGCGCT TTTCTGCTGT ACTGCCTGCT TGGCCAGTAT
CTTCCCGCCC CGCTCAACCA CCGCGGCTAT GATTTTTCGC AGGTGATCGA GCATATGGCC
TATGGCACGG AGGGGATCTA CGGCATCCCC ATCTATGTCT CGGCCACCTA TATCTTCCTC
TTTATTCTCT TTGGCTCTTT CCTTGAGCGT GCCGGCATGA TCCGGCTTTT CACCGACGTC
TCGCTCGGGC TCGTCGGCCA TGCCCAAGGC GGGCCTGCCA AGGTCGCCGT CATTACTTCG
GCTCTCATGG GCACCATCTC GGGCTCCGGC GTGGCGAACG TGGTCACCAC CGGCCAGTTC
ACGATTCCGC TCATGAAGCG CTTCGGATAC CGGCCGGCCT TTGCCGGTGG AGTGGAGGCC
ACCGCGTCGA TGGGCGGGCA GATCATGCCG CCCGTGATGG GAGCCGTCGC CTTCATCATG
GCGGAGACGC TCGGCATCGA ATATTACGAG GTGGTCAAGG CCGCGATCGT CCCGGCCTTG
CTGTATTTCT CCTCGGCCTT CTGGATGGTG CATCTGGAAG CGGGCAAGCG CGGGCTGCAC
GGCCTGCCCC GCGCCGAACT GCCTTCGGCG GTCGCTGCGC TGCGCAGAGG CTGGTATTTG
ATCCTTCCGC TCGCCGTGCT CGTCTATCTT CTCTTTAGCG GCTATACGCC GCTTTACGCG
GGCACGGTCG GCCTGGGGCT TACGATCCTC CTGGTGTTGG GCGGATCGGT GGCGCTTGGC
CTGCCCTCCT ATGTTTTGCG CGTCATCTTC TGGGTGGGGC TGGGCCTTGT GGCGGCCAGC
TTCTTTCGTT TCGGCATCAA TGTCGTTCTT CTCGCAGGGC TGGCTCTCAT CCTTGCCAAT
CTTGCGGTCG AGGGCGGGAT CAAGACGATT GACAATTGTC GCGCGGCACT GGCCGAAGGC
GCCAAAGCAG CGCTTCCAGT CGGCGTAGCC TGCGCGATCG TGGGCGTCGT CATTGGCGCC
CTGACGCTGA CCGGCGCTGC CAACACCTTC GGGCAGTTTA TCGTCTCGGT TGGCGAAAAG
AGCCTCTTCC TGTCGCTCAT CCTGACGATG ATCACCTGCC TCATTCTCGG CATGGGCATC
CCGACGATCC CCAATTACAT CATTACCGGT TCGATCGCTG GTCCCGCTTT GCTCGCGCTC
GGCGTTCCGC TCATCGTCAG CCACATGTTC GTCTTCTACT TCGGCATCCT GGCCGATCTC
ACGCCTCCCG TCGCCCTTGC GTGCTTCGCG GCAAGTCCGA TTGCGCGCGA GAGTGGGCTA
AAGATCTCCA TGGAAGCCAT AAAAGTCGCG ACGGCCGGTT TTGTCATTCC GTTTATGGCC
GTCTATTCGC CCGTACTAAT GCTCCAGGAT GGCGGGCCGA CTGCAGCCGC CTTCGGATAT
CCGTTGGCGG TCGCCTACAT CATCGTAAAA GCAGGCCTTG CGATCGGCCT CTGGGGCGCG
GCCGTCATCG GCTACCTGAA CCGCCCGCTT TCCTGGTGGG AGCGGCTCCT TGCCGCAGCA
GCGGCCTTCA CGCTGGTTGC AGCCTTGCCG ATAACGGACG AGATCGGCTT TGGTCTTTCG
GCCATCCTTC TTGCCATCGT ATTTCTTCGG CGCCAGACCT CGCGAACCAA GCGAGCCGGC
TCTGAAAGAG GCAGTGCGGC CGAATGA
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| Protein sequence | MTTAESSSPP ALKPELLDPT HGDFKRTIEG RLLMWIAVAF SVFQIGTAAH LINLPSQIVR
AFHVGFLLLL VFPVVASARN AGRPVKALAW LFAFAGVAVA LYQFVEYEPL ILRAGYPTQV
DIVVGVIALI TVFAASYVLM GPPLPIISGA FLLYCLLGQY LPAPLNHRGY DFSQVIEHMA
YGTEGIYGIP IYVSATYIFL FILFGSFLER AGMIRLFTDV SLGLVGHAQG GPAKVAVITS
ALMGTISGSG VANVVTTGQF TIPLMKRFGY RPAFAGGVEA TASMGGQIMP PVMGAVAFIM
AETLGIEYYE VVKAAIVPAL LYFSSAFWMV HLEAGKRGLH GLPRAELPSA VAALRRGWYL
ILPLAVLVYL LFSGYTPLYA GTVGLGLTIL LVLGGSVALG LPSYVLRVIF WVGLGLVAAS
FFRFGINVVL LAGLALILAN LAVEGGIKTI DNCRAALAEG AKAALPVGVA CAIVGVVIGA
LTLTGAANTF GQFIVSVGEK SLFLSLILTM ITCLILGMGI PTIPNYIITG SIAGPALLAL
GVPLIVSHMF VFYFGILADL TPPVALACFA ASPIARESGL KISMEAIKVA TAGFVIPFMA
VYSPVLMLQD GGPTAAAFGY PLAVAYIIVK AGLAIGLWGA AVIGYLNRPL SWWERLLAAA
AAFTLVAALP ITDEIGFGLS AILLAIVFLR RQTSRTKRAG SERGSAAE
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