| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_4001 |
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| Symbol | |
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| ID | 4181148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | + |
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| Start bp | 4307882 |
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| End bp | 4308895 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638069897 |
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| Product | type II secretion system protein |
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| Protein accession | YP_676533 |
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| Protein GI | 110636325 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGGTC TGTCGCTCAG CCTCCTGGCC TTTGTCGTGC TGGCGGCCTG CAGCGCAGGA
GGACTGGCTT ATGTGCTGAT GTTCAACACG ATCGCCAGCG AGAAAAAAGT CGAACGGCGG
CTCGAGACCG TCAAACGCGC TCAGATCGAG GGCAATGTGG TAAGGGCGGC GCGCGACCGG
GCGGCAGAAA TTGCCAAGAG ACGCAGGTCC ATCCAGGAAA GCTTAAAGGA TATCGAGACG
AGGCAGAAGG ATCAGGATCG TTTCCTGAAG CGGCCGCCGC TGAAAATCCA GATCCGCCAG
GCGGGATTGG AGATGAGCAT GGAGCGCTTC TACATCCTGT CGGCTGTGGT CGGATTGCTG
TTCGTGATCG TGACTTTTAT CGCCGGAGCA CCGCTGCTCG CGGTGGCGGG TGCAATGGTC
GCCGGCTTCT TTGGCGCTCC GCGCTGGATC ATTGCTTATT TGCGCAGGCG CCGCGTCCAG
GCGTTCCTCA ACGAATTTCC AAACGCGCTG GATATCATCG TGCGCGCCGT CAAGTCGGGC
CTCCCGCTGA ATGACGCGGT GCGTATGATC GCGGTCGAGG CACAGGAACC GGTTCGAACG
GAATTCCGGC GGCTGGTTGA AGCCCAGCAG CTCGGGCTTC CCATGGCCGA GGCTGCCATG
CGCATGTCGG AGACCATGCC CTGCCCCGAA GTCAATTTCT TCGGGATCGT GCTTCAGATC
CAGAGCCAGG CCGGCGGTAA TCTTTCCGAA GCGCTTGGCA ATCTATCGCG CGTATTGCGG
GAACGGAAAA AGATTAAGGC ACGAGTGCAG GCGCTCTCGA TGGAAGCCAA GGCCTCTGCC
GTGATCATCG GCGCTTTGCC GATTGTCGTT GCCGCGCTCG TCTACATTAC GAGCCCGGCC
TATATCATGC CGCTCTTCAG CGAAAGTGTC GGCCACTTGA TCCTCGGGCT TTCCGCGGTC
TGGATGAGCA TCGGCATCTT CGTGATGCGC CAGATGATGA ATTTCGAGGT CTGA
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| Protein sequence | MFGLSLSLLA FVVLAACSAG GLAYVLMFNT IASEKKVERR LETVKRAQIE GNVVRAARDR
AAEIAKRRRS IQESLKDIET RQKDQDRFLK RPPLKIQIRQ AGLEMSMERF YILSAVVGLL
FVIVTFIAGA PLLAVAGAMV AGFFGAPRWI IAYLRRRRVQ AFLNEFPNAL DIIVRAVKSG
LPLNDAVRMI AVEAQEPVRT EFRRLVEAQQ LGLPMAEAAM RMSETMPCPE VNFFGIVLQI
QSQAGGNLSE ALGNLSRVLR ERKKIKARVQ ALSMEAKASA VIIGALPIVV AALVYITSPA
YIMPLFSESV GHLILGLSAV WMSIGIFVMR QMMNFEV
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