Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_4000 |
Symbol | |
ID | 4181147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | + |
Start bp | 4306380 |
End bp | 4307882 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638069896 |
Product | type II secretion system protein E |
Protein accession | YP_676532 |
Protein GI | 110636324 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.737782 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCGGGA GAAGAGGAAC AGGCGACACC ACAGGCACAG TCAGGTCACG CCTCGTCGTT CAGCCGGCGC TGGCTCACGC CGAAGCAGAT ATCTCTGCTC CCAAGCCCCG TCCGCAGCAG CCGGATGCAG CGGGCGCAAT TGTTGCTCCG CCTGCCGCCT CCAGTCAGGA GAAACCCGCG CCCGCTCCTG CCCAGGCGCC GGCTCGCCCG GCGGCTCACA GCGACAGCTA TTACGACACC AAGGGCCAGG TTTTTTCCGC CCTCATCGAT ACGATCGATC TTTCCCAACT GGCGAAGCTC GACGCCGACA GCGCCCGGGA AGAAATACGC GACATCGTCA ACGACATCAT CGCAATCAAA AATCTTGCGA TGTCGATATC CGAGCAGGAA GAGCTGCTGG AGGACATCTG CAACGACGTG CTGGGCTTTG GGCCGCTGGA GCCGCTGCTC GCGCGCGATG AAATCGCCGA TATAATGGTG AACGGCGCGC GAAACGTCTA CATTGAGGTG AACGGGAAAG TCGAGCAGAC GAATATCCGT TTCCGCGACA ATCAGCAGCT TCTCAACATC TGTCAGCGCA TCGTAAGCCA GGTTGGCCGG CGGGTGGACG AGTCGAGCCC GATCTGCGAT GCGCGCCTGC CCGACGGCTC CCGTGTCAAC GTAATCGCGC CGCCGCTGGC GCTCGACGGC CCGACGCTGA CCATCCGCAA GTTCCGCAAG GACAAGCTGA CGCTCGATCA GCTTGTCCGG CACGGCAGCA TCTCGCCGGA GGGCGCGGAG GTGCTGAAAA TTATCGGCAG AGTGCGCTGC AACGTCGTCA TTTCCGGTGG CACGGGCTCC GGCAAGACCA CGTTGCTCAA CTGTCTCACG AATTTCATAG ACCGGGATGA GCGTGTCATA ACCTGCGAGG ATTCGGCCGA ACTTCAACTG CAGCAGCCTC ATGTAGTGCG GCTCGAAACC CGCCCGCCCA ACCTCGAAGG CGAAGGCGAG GTGACGATGC GCGATCTCGT GCGCAACTGC TTGCGTATGC GGCCCGAACG TATCATCGTG GGTGAGGTGC GCGGGCCCGA GGTGTTCGAC CTGCTCCAGG CCATGAACAC GGGTCATGAC GGGTCCATGG GCACGATCCA TTCCAACAGC CCGCGTGAAT GCCTGAACCG CATCGAATCC ATGGTGGCCA TGGGCGGCTT TTCCCTGCCG CAGAAGACTG TTCGCGAAAT CATCGTCGGC TCTATCGACG TCATCATTCA GGCCGCGCGC CTGCGTGACG GCTCCCGTCA CATCACCCAC ATAAGCGAGG TGCTGGGTAT GGAAGGGGAT GTGATCGTCA CTCAAGACCT GGTGGTCTTC GACATAAAGG GGGAGGACGC GTCGGGCCGC ATCATCGGCA AGCACGTCTC CACCGGCATC GGCCGGCCTG CTTTCTGGGA ACGCGCGCTC TATTATGGCG AGGAGGCGCG GCTCGCAGCC GCGCTCGAAG CGATGGAAAA GCAGGCTCTC TGA
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Protein sequence | MFGRRGTGDT TGTVRSRLVV QPALAHAEAD ISAPKPRPQQ PDAAGAIVAP PAASSQEKPA PAPAQAPARP AAHSDSYYDT KGQVFSALID TIDLSQLAKL DADSAREEIR DIVNDIIAIK NLAMSISEQE ELLEDICNDV LGFGPLEPLL ARDEIADIMV NGARNVYIEV NGKVEQTNIR FRDNQQLLNI CQRIVSQVGR RVDESSPICD ARLPDGSRVN VIAPPLALDG PTLTIRKFRK DKLTLDQLVR HGSISPEGAE VLKIIGRVRC NVVISGGTGS GKTTLLNCLT NFIDRDERVI TCEDSAELQL QQPHVVRLET RPPNLEGEGE VTMRDLVRNC LRMRPERIIV GEVRGPEVFD LLQAMNTGHD GSMGTIHSNS PRECLNRIES MVAMGGFSLP QKTVREIIVG SIDVIIQAAR LRDGSRHITH ISEVLGMEGD VIVTQDLVVF DIKGEDASGR IIGKHVSTGI GRPAFWERAL YYGEEARLAA ALEAMEKQAL
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