Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_3996 |
Symbol | |
ID | 4180458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | + |
Start bp | 4302014 |
End bp | 4302826 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638069892 |
Product | pilus assembly protein cpaB |
Protein accession | YP_676528 |
Protein GI | 110636320 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3745] Flp pilus assembly protein CpaB |
TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAAAT CCCGCATTGT CATTCTCGGC GTAGCCGTGG CTGCGGCGAT CGGGGCGGGA TACCTGGCCA AGAATCTCGC ATCACCGCAG AAGGTGGCCG CGGTTGCGCC GACGCCTGAG AAGCCGCCAG TTAGCCTTAC GGACGTCCTG GTGCTTACGC AGGACGTTCC CGTCGGGGAG CCGATAAATG GCGCGGCGAT GTGGCAGGCT TGGCCGGCTG AGAGCGTGAT GGATGCCTTC ATCACGCGGG AGCGAGAGCC GGATGCCCTT GAAACGATAA GAAATGCGGT TGCGCGCCTG CCTCTCTTTG CGGGCGAGCC GGTACGCCGC TCCAAGCTGG TGGGGGAGGG CGATAGTTTT CTGGCTGCGA TCCTGCCGCC GGGAAAGAGA GCTGTGGCCA CTCGCATAGC GGCGGACACT TCCGCGGGCG GCTTCATCCT GCCGAATGAC CGCGTCGATG TGATCATGAC GCGCCGCGCG GACGAGGGCT CAAGCCCTAA CGGCTTCATT ACCGAGACGG TTCTGGAGAA TATCCGTGTG CTGGCGATCG ACCAGACGAT CCACGAAGAC GAGGAAGGCC GCCGCGTCAA GCTCGGGGAA ACAGCCACGC TCGAGCTCAC GCCGGAGGAG GCCGAAGTCA TCACCGTGGC GCAGCAATTG GCGGATCGCT TGACGCTTTC CCTTCGCTCA GTCGCGGATT CGAATGAAGA AGCTACCGAC CGCGGCCTTC ATCTCGTTAC CGGCACCGGG CGCGGAGACA GTGTGCGGCT GATCAAATCC GGCGAAACAA GCATCGTCGG AACACGGCGA TAG
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Protein sequence | MNKSRIVILG VAVAAAIGAG YLAKNLASPQ KVAAVAPTPE KPPVSLTDVL VLTQDVPVGE PINGAAMWQA WPAESVMDAF ITREREPDAL ETIRNAVARL PLFAGEPVRR SKLVGEGDSF LAAILPPGKR AVATRIAADT SAGGFILPND RVDVIMTRRA DEGSSPNGFI TETVLENIRV LAIDQTIHED EEGRRVKLGE TATLELTPEE AEVITVAQQL ADRLTLSLRS VADSNEEATD RGLHLVTGTG RGDSVRLIKS GETSIVGTRR
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