Gene Meso_3996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3996 
Symbol 
ID4180458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp4302014 
End bp4302826 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content63% 
IMG OID638069892 
Productpilus assembly protein cpaB 
Protein accessionYP_676528 
Protein GI110636320 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3745] Flp pilus assembly protein CpaB 
TIGRFAM ID[TIGR03177] Flp pilus assembly protein CpaB 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAT CCCGCATTGT CATTCTCGGC GTAGCCGTGG CTGCGGCGAT CGGGGCGGGA 
TACCTGGCCA AGAATCTCGC ATCACCGCAG AAGGTGGCCG CGGTTGCGCC GACGCCTGAG
AAGCCGCCAG TTAGCCTTAC GGACGTCCTG GTGCTTACGC AGGACGTTCC CGTCGGGGAG
CCGATAAATG GCGCGGCGAT GTGGCAGGCT TGGCCGGCTG AGAGCGTGAT GGATGCCTTC
ATCACGCGGG AGCGAGAGCC GGATGCCCTT GAAACGATAA GAAATGCGGT TGCGCGCCTG
CCTCTCTTTG CGGGCGAGCC GGTACGCCGC TCCAAGCTGG TGGGGGAGGG CGATAGTTTT
CTGGCTGCGA TCCTGCCGCC GGGAAAGAGA GCTGTGGCCA CTCGCATAGC GGCGGACACT
TCCGCGGGCG GCTTCATCCT GCCGAATGAC CGCGTCGATG TGATCATGAC GCGCCGCGCG
GACGAGGGCT CAAGCCCTAA CGGCTTCATT ACCGAGACGG TTCTGGAGAA TATCCGTGTG
CTGGCGATCG ACCAGACGAT CCACGAAGAC GAGGAAGGCC GCCGCGTCAA GCTCGGGGAA
ACAGCCACGC TCGAGCTCAC GCCGGAGGAG GCCGAAGTCA TCACCGTGGC GCAGCAATTG
GCGGATCGCT TGACGCTTTC CCTTCGCTCA GTCGCGGATT CGAATGAAGA AGCTACCGAC
CGCGGCCTTC ATCTCGTTAC CGGCACCGGG CGCGGAGACA GTGTGCGGCT GATCAAATCC
GGCGAAACAA GCATCGTCGG AACACGGCGA TAG
 
Protein sequence
MNKSRIVILG VAVAAAIGAG YLAKNLASPQ KVAAVAPTPE KPPVSLTDVL VLTQDVPVGE 
PINGAAMWQA WPAESVMDAF ITREREPDAL ETIRNAVARL PLFAGEPVRR SKLVGEGDSF
LAAILPPGKR AVATRIAADT SAGGFILPND RVDVIMTRRA DEGSSPNGFI TETVLENIRV
LAIDQTIHED EEGRRVKLGE TATLELTPEE AEVITVAQQL ADRLTLSLRS VADSNEEATD
RGLHLVTGTG RGDSVRLIKS GETSIVGTRR