Gene Meso_3988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3988 
Symbol 
ID4180450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp4295584 
End bp4296075 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content62% 
IMG OID638069884 
Productprotein required for attachment to host cells-like 
Protein accessionYP_676520 
Protein GI110636312 
COG category[N] Cell motility 
COG ID[COG5622] Protein required for attachment to host cells 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0273028 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGGCA TTCGGCTCGA ACACGGCATT TGGGTTCTCG TGGCAGATGG CGAAAAGGCA 
CTGTTCCTGC ACAACAAGGG CGATGCCGAA TATCCCAATC TTGAAGTCGT GCGCGAGTTG
CGTGACGAAA ACCCGCCCAC GCGCGAGCAG GGAACGGACC AGCCCGGCCG CTATTCCGAC
GGCGCAAACG TGCATAAGAG CGGCTTCGCG GAGACGGACT GGCACCGCAT TGAGAAGGAG
CGCTTCGCGG AAGAGATTGC CGAGCGGCTC TACAAGATGG CTCACAGCGG CCGGTTCGAA
AAGATCGTGC TCGTTGCGCC GCCGCTGGTG CTGGGTGCGC TACGCAAGGC ATTGCACAAG
GAAGTCGATG CGCGGGTCAC GGGCGAGCTA TCCAAGACGC TCACGAACCA TACCATCTTC
GATATCGAGA AGACGTTGAC GAGCGGCGGC GCACCGACCT TTCCACTGCA GGGCGGCTCC
CGCGTGCGGT GA
 
Protein sequence
MAGIRLEHGI WVLVADGEKA LFLHNKGDAE YPNLEVVREL RDENPPTREQ GTDQPGRYSD 
GANVHKSGFA ETDWHRIEKE RFAEEIAERL YKMAHSGRFE KIVLVAPPLV LGALRKALHK
EVDARVTGEL SKTLTNHTIF DIEKTLTSGG APTFPLQGGS RVR