Gene Meso_3984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3984 
Symbol 
ID4180446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand+ 
Start bp4289400 
End bp4290017 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content57% 
IMG OID638069880 
Product3'-5' exonuclease 
Protein accessionYP_676516 
Protein GI110636308 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0349] Ribonuclease D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATCC GATTTCATCA ATACGACCTG CCCGATCTCT CCCGCTACGA TGTGGACGCG 
GTGGCGATCG ATACCGAAAC GCTGGGGCTC AATCCCCATC GTGACAGGCT ATGCGTGGTG 
CAGCTTTCTC CAGGGGACGG AACGGCGGAT GTCGTGCAGA TCGCGGCAGG GCAGAGGCGC 
GCTCCAAACC TTGTCGCGCT TCTGCGAAAC CGGCGCATCA CGAAATTATT TCACTATGCC 
CGTTTCGACA TAGCGGTTCT CTACCACTCG TTCGGCGTCA TGCCCGATCC GGTTTTCTGC 
ACCAAGATTG CCTCGCGCCT GACGCGGACT TACACCGATC GTCACGGCCT CAAGGATATC 
TGCTACGAGC TTCTGCAGGT AAATCTTTCC AAGGCGCAGC AGTCTTCCGA TTGGGCAGCG 
GAACAGCTGA CTCCGGAACA GCTGGAATAT GCTGCGTCCG ATGTGCTTTA TCTTCATCGC 
CTGGCGGACG TGCTGCAACA GCGTCTGATG CGGGACGGCC GCGCGCGGGA AGCGCAGGCT 
TGCTTCAAGT TTTTGCCCAC ACGAGCAAAG CTGGATCTCA TGGGTTGGGA CGAGCAAGAC 
ATATTTGCAC ATAGTTAA
 
Protein sequence
MTIRFHQYDL PDLSRYDVDA VAIDTETLGL NPHRDRLCVV QLSPGDGTAD VVQIAAGQRR 
APNLVALLRN RRITKLFHYA RFDIAVLYHS FGVMPDPVFC TKIASRLTRT YTDRHGLKDI 
CYELLQVNLS KAQQSSDWAA EQLTPEQLEY AASDVLYLHR LADVLQQRLM RDGRAREAQA 
CFKFLPTRAK LDLMGWDEQD IFAHS