Gene Meso_3978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3978 
Symbol 
ID4180440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp4282770 
End bp4283552 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content55% 
IMG OID638069873 
Productextracellular solute-binding protein 
Protein accessionYP_676510 
Protein GI110636302 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAAC TGCTCTGCAC ATTCATGCTT GCCGTTGCGG CACTTGTCGG AAGCGCCCCA 
TTGGCTGCCG CACAGACTTT GGAGGCCATC GAATCCCGCG GCAAGGTGCT GATCGCGATA
GACACCGCGG TGCCGCCATA CGGCATGCTC GACGAAAACA TGCAGCCGGT GGGATACGAT
GTCGACATGG CGAAGATGAT CGCTCAAGAT CTCGGCGTCG AACTTGAGAT CGTTCCGGTC
ACCGGCCCAA ACCGAATTGC CTATCTCGAA AGCAATCGGG CAGATATGGT GATTTCCACT
TTCGGCGTGA CTCCGGAGCG CGCAAAGACA GTTAACTTCA CCATACCTTA CGGCGCAAAT
CAGATTTGGA TCTTTGGGCA AAAAGGCGAG GCTGCCTCCT CCATTGCTGA TTTGTCCGGG
AAGCCGGTGG CTGTCGTTCG AGGCTCGATT CAGGACAATG TTGTCACCCG AATGCTGCCT
GATGCAGTGA TCCGCAGATA TGAGGATGAT GCGACCGCCG CGACAGCATT CCTGTCAGGA
CAGGTACCGT TTATCGCCAC AGGCACGCTT ATTGGCGACA AACTCGTCGC GCGGGACACC
GAGAATTACG AGCGCAAACT TCTGCTTGGG CTAAATCCCT ATTCCATCGG GCTTCGAAAG
GGCGATCTGG AGTTCCTCCA CCTGATCAAT ACCTTCATCT ATTCTTATCG GCTGGGCGGC
CAGTTAAATG AGCTGAGCAA AAAGTGGATC GGCGCAGAGT TGGGGAACCT ACAGTCCTTC
TAA
 
Protein sequence
MKQLLCTFML AVAALVGSAP LAAAQTLEAI ESRGKVLIAI DTAVPPYGML DENMQPVGYD 
VDMAKMIAQD LGVELEIVPV TGPNRIAYLE SNRADMVIST FGVTPERAKT VNFTIPYGAN
QIWIFGQKGE AASSIADLSG KPVAVVRGSI QDNVVTRMLP DAVIRRYEDD ATAATAFLSG
QVPFIATGTL IGDKLVARDT ENYERKLLLG LNPYSIGLRK GDLEFLHLIN TFIYSYRLGG
QLNELSKKWI GAELGNLQSF