| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3972 |
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| Symbol | |
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| ID | 4183024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | + |
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| Start bp | 4276666 |
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| End bp | 4277475 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638069867 |
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| Product | shikimate dehydrogenase |
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| Protein accession | YP_676504 |
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| Protein GI | 110636296 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCAACC ATCCCGAAAA CCGTGAAATC ACCGGCCGCA CCCGGGTGCT GGGAATTCTC
GCGCATCCGA CCGAGCATGT AAAAGCGCCT CCGGCAATCA ATCGCATAGC AGCAGAGCGG
GGAAAAGACG CCGTCATGGT ACCCTTTGAT GTTGCACCGG AAGAGTTGGC GAAGGTTGTT
GAAGCGTTGC GACAAATAAA AAGCCTCGAT GCGTCAATCG TTACCGTTCC TCACAAGCAG
TCGATTGTGG CGCTTTGCGA TGAGCTGACA CCTCAGGCCC GCGCCGTGAA CGCTGTAAAT
ATCCTTCGCT TTGAACCCGA TGGCCGGCTG ATTGGCGGCC AACTTGACGG TATCGGGTTC
GTTGAGGGGC TGCGCTCGGC AGGCGTAGAC CCTGCTGGAA TGCGCGTCTT CCTTGCCGGA
GCTGGCGGTG CCGCGAGCGC AGTCGCGTTT GCGCTGGCAG ACGCCGGAAT TTCGCACATC
ACCCTGTCCA ACCGGAGCAG GCACAAAATC GAAAATTTGC GTGACCGCTT GCGGAAGTTC
AGGTCTGATC TGTCCGTCTC GCTCGGCTCG GGCGACGCGG GTGGTCATGA TCTTGTCATC
AACGGCACAA CACTCGGTAT GAAACCCGAA GATCCGCTGC CGCTGGATGT TGCCACATTA
CACGCGGGAA TGGTCGTTGC AGAAGTCATA ATGGAGCCGG AAATGACTCC CCTGCTGCGT
GCTGCGCAAG CGGCCAGCTG CCGAATTCAT CACGGCCGCC ATATGCTTCA GCACCAGCTC
CAACTCATGG CCGACTTTAT GGGCCTTTGA
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| Protein sequence | MPNHPENREI TGRTRVLGIL AHPTEHVKAP PAINRIAAER GKDAVMVPFD VAPEELAKVV
EALRQIKSLD ASIVTVPHKQ SIVALCDELT PQARAVNAVN ILRFEPDGRL IGGQLDGIGF
VEGLRSAGVD PAGMRVFLAG AGGAASAVAF ALADAGISHI TLSNRSRHKI ENLRDRLRKF
RSDLSVSLGS GDAGGHDLVI NGTTLGMKPE DPLPLDVATL HAGMVVAEVI MEPEMTPLLR
AAQAASCRIH HGRHMLQHQL QLMADFMGL
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