Gene Meso_3970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3970 
Symbol 
ID4183022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp4274101 
End bp4275630 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content57% 
IMG OID638069865 
ProductD-galactarate dehydratase/Altronate hydrolase-like 
Protein accessionYP_676502 
Protein GI110636294 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2721] Altronate dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAGTC CCAAACTGCA TCGCGCGGCC ATTCGCCTAC ACGAGGCCGA TAATGTCATT 
GTGGCCACCC GCCGCCTAGA GAGCGGGACT GATCTCGGGG AGACGGTCAC GCTCGAGCCG
ATTCCGAACG GGCACAAGGT CGCGACATCC GAAATCAAGC CGGGTGATCA TGTAATTAAG
TACGGTCACG TTATCGGTGT CGCGAGCAAG CCGATAAGGC CAGGTCAGCA TGTGCACTTG
TCGAACCTCG CCATGCTGGA AAGCAAAACG GCACACGAGT TCGCAGTCGA TGGCGGTCCG
ACCCCTCTCT TACCAGTCGA GGAGCGCAGA ACCTTCGAAG GTTACGTCCG CGAGAACGGG
CTCGTCGGGA CGCGCAATTA CATCGGCATC ATCACGTCGG TGAATTGCTC TGCTACCGTC
TCGCGAGCAA TCGCCGATCA TTATAAGACT AGAGGGTTCG GGGATTACCC AAATATCGAC
GGGGTTGTCG CGCTGACCCA TGGGACCGGG TGCGCGATCC CGACCAACAC GGAAGGCTAT
GTCTATCTTC GTCGCGTCCT GAACGGCTAT GCCCGCAACC CCAACTTCGC CGCGATCCTG
ATCATTGGCC TGGGTTGCGA GACAAACCAG ATCAGCCACC TCGTTGACGC ATTCGAACTC
CGGGATATCC CGCGGCTCCA TACCATGACA ATCCAGCAGG TGGGGGGCAC ACGCAAGACG
ATCGAGGAGG GCATTCGTGT TATCGATGGA ATGCTTGAGG AGATAAACGC GACCAAGCGC
CAGACCGTGC CGCTATCGGG GCTTAAAGTG GCTCTGCAGT GCGGTGGGTC CGATGCATAC
TCCGGAATCA CGGCGAATCC TGCCCTTGGC TACGCATCTG ATCTCGTCGT TAAGCATGGA
GGGACGGCCG TCCTTAGCGA AACCCCCGAA ATCTATGGCG CGGAGCATCT TCTTACCCGT
CGCGCTGTCA CATCCGAGAT CGCCGAAAGG CTGATGGCGC GGATAGAGTG GTGGCGCAAC
TACACGTCCC TGAACGGCGC CGAGCTGAAC AACAACCCTT CTCACGGCAA CAAGGAAGGT
GGTCTGACGA CCATACTGGA AAAATCCTTG GGAGCGGTGG CCAAGGGCGG CTCCATGCCG
CTGCAGGCTG TCTATGAGTA TGCCGAGATC ATCGACACCC CTGGTTTTGT CTTCATGGAT
ACGCCTGGCT ACGATCCCGT CGCAGTGACG GGTCAAGTTG CAGGCGGATG CAATCTCATC
GTATTCACGA CCGGACGCGG ATCCGTTTCG GGCTTCAAGC CCGCGCCTTG CATTAAAGTT
GCCACCAATA CCGCCATGTA CGAAAGGATG AGGGAGGACA TGGATATCAA TTGCGGTGGC
ATTATTGATG GCAGCGACAC TATTGCGGAC GCCGGGCAGC GGATTTTTGA GCGAATCATC
GCGGTAGCAT CCGGCGAGAA AAGCTTGAGC GAAACATTCG GCTATGGTGA TAACGAGTTC
GTTCCCTGGC AAATCGGGGC TGTCACTTAG
 
Protein sequence
MTSPKLHRAA IRLHEADNVI VATRRLESGT DLGETVTLEP IPNGHKVATS EIKPGDHVIK 
YGHVIGVASK PIRPGQHVHL SNLAMLESKT AHEFAVDGGP TPLLPVEERR TFEGYVRENG
LVGTRNYIGI ITSVNCSATV SRAIADHYKT RGFGDYPNID GVVALTHGTG CAIPTNTEGY
VYLRRVLNGY ARNPNFAAIL IIGLGCETNQ ISHLVDAFEL RDIPRLHTMT IQQVGGTRKT
IEEGIRVIDG MLEEINATKR QTVPLSGLKV ALQCGGSDAY SGITANPALG YASDLVVKHG
GTAVLSETPE IYGAEHLLTR RAVTSEIAER LMARIEWWRN YTSLNGAELN NNPSHGNKEG
GLTTILEKSL GAVAKGGSMP LQAVYEYAEI IDTPGFVFMD TPGYDPVAVT GQVAGGCNLI
VFTTGRGSVS GFKPAPCIKV ATNTAMYERM REDMDINCGG IIDGSDTIAD AGQRIFERII
AVASGEKSLS ETFGYGDNEF VPWQIGAVT