Gene Meso_3959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3959 
Symbol 
ID4183011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand- 
Start bp4263401 
End bp4264045 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content63% 
IMG OID638069854 
ProductSH3, type 3 
Protein accessionYP_676491 
Protein GI110636283 
COG category[S] Function unknown 
COG ID[COG4991] Uncharacterized protein with a bacterial SH3 domain homologue 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACCC GTCTTCTGCT GGCGGCTGCC GCGTTTGGGG CCGCGCTGGC GCTGCCCGGT 
GTTGCAGCGG CGGCCAACGC GTTCACAACC GGCAATGTCA ATATGCGTGC CGGCCCAAGT 
ACGCAGTATC CAAGAGTAAT GACGCTTCCA CAGGGCGCAG CCGTCGAGGT CTATGGCTGC 
ACCAATGGCT GGAGGTGGTG CGATACGAGC TGGCGCGGCT ATCGCGGCTG GGTCAGCGCA 
TCTTACCTGC AAATGATGTA TCGCGAACGC AGGGTCTATG TCCCGGAATA TGCACCCCGT 
CTTGGCCTGC CCGTCATCAC GTTCGAGTTC GGTTCCTACT GGGACCGGTG GTACAGCGAC 
CGGCCCTGGT ACCGCGATCG TGATCGGTGG CGTCGCGGGG ACTGGGATCG CGACAGGCGG 
GACTGGGATG GCGATAGACG GGACCGGGAC CGCGACAGAT GGGACCGCGA TCGCGATCGC 
TGGGAACGTG AGCGGGACCG GGAAAGGGTT CGTGTGCAGC CTCGGGAGCG TGACCGAGCA 
GAAGATAGAC GGTCAGGCTT TGATATCCGC AGACGGGGCG ACACCGGGCC ACAGCGTGGC 
GAAGGCCCCG ATAGATGTGG TCTTGCAGGG ATAGTAAGGT GCTAA
 
Protein sequence
MKTRLLLAAA AFGAALALPG VAAAANAFTT GNVNMRAGPS TQYPRVMTLP QGAAVEVYGC 
TNGWRWCDTS WRGYRGWVSA SYLQMMYRER RVYVPEYAPR LGLPVITFEF GSYWDRWYSD 
RPWYRDRDRW RRGDWDRDRR DWDGDRRDRD RDRWDRDRDR WERERDRERV RVQPRERDRA 
EDRRSGFDIR RRGDTGPQRG EGPDRCGLAG IVRC