| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3945 |
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| Symbol | |
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| ID | 4180250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 4248490 |
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| End bp | 4251426 |
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| Gene Length | 2937 bp |
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| Protein Length | 978 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638069839 |
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| Product | DNA polymerase I |
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| Protein accession | YP_676477 |
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| Protein GI | 110636269 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAG GCGACCATCT CTTCCTCGTG GACGGCTCGG GCTATATTTT TCGGGCCTAT
CATGCGCTTC CCCCCCTCAA CCGCAAGTCG GACGGGCTTC CAGTCAGCGC GGTTCTGGGC
TTCTGCAACA TGGTGTGGAA GCTGTTGCGC GACGCAAGGG ATACGGCTGT CGGGGTCACA
CCCACTCATT TCGCTGTGAT TTTCGACTAC TCATCAAAAA CCTTCCGCAG CAAAATCTAT
CCCGAATACA AGGCGAATCG CACTGAGCCG CCGGAAGACC TCATTCCTCA GTTCGGCCTC
ATTCGCGAGG CTACCCGCGC CTTCGATCTG CCCTGCATCG AAATGGAAGG CTACGAAGCC
GACGACTTGA TCGCCACCTA TGCGCGCCTG GTCTGCGAGG CGGGAGGCGA CACGACGATC
ATTTCTTCCG ACAAGGATCT GATGCAGCTC GTAGGGCCGA CTGTCTCCAT GTACGACCCC
ATGAAGGACA AGGAGATCAG GGTTCCGGAG GTTGTCGAGA AATGGGGTGT TCCGCCGGAA
AAAATGATCG ACCTGCAGGC ACTCACCGGC GATACGATCG ATAATGTTCC CGGAGTGCCG
GGGATCGGGC CGAAGACTGC CGCCCAGCTC CTCGAAGAAT ATGGGGACCT GGACACGCTG
CTTTCCCGCG CTCATGAAAT CAAGCAGCAG AAGCGCCGCG AAAACCTCAT CGAATTCGCG
GAAAAGGCCA GGATCTCGCG CGAACTCGTG CGGCTCAAAA ACGACGTGAC AGTGGAGATG
CCGCTCGATG CGCTGGCCCT CAACCCGCCG GACGGGCCGA AGCTGATCGC CTTTTTGAAG
GCAATGGAAT TCTCCACTCT CACCCGCCGC GTGGCGGAGG CGACGGGAGC GGATGCCGCA
GATGTCGAAC CGGCATATAT AGAAGTCCAG AAGGGCGCCG AGGCGCACGG ACCTGACCTC
ACTGTTCCGG CAACGGGCAT CGGCGAGCCT GGGGCCGAAG GGGAGGTGGC GCCGGAGAGG
GACGACGGGG CCGAAACGCC GGAAAAGCTC GCCCGAAAGC TTGCCGACGC CGCCAGCCAC
GAGGCCTTCG ATCACTCGCG CTATGTCTGC ATTCGCGACC TGGAGACGCT GAACCAGTGG
GTGGCCGAGG CGCGAGAGAC AGGTGTTGTC GCTCTCGACA CGGAGACCAC ATCGCTCGAC
CCGATGCAGG CCGAACTTTG CGGCATTGCT CTGGCGACGG CGCCTAACCG GGCGGCCTAT
CTCCCCCTGT CGCACAAAAA CGGTGCGGAA GACCTGCTTG GCGGCGGCAT GGTGGACGGG
CAGATCAGGG TGGAGGAAGC CCTTGCGGTT CTGCGCCCCC TCCTCCAGGA CCCCTCGGTA
CTGAAGATCG GCCAGAACCT CAAATATGAC TGGGTGCTTC TTTACCGCCA CGGCATCGAG
ATCGCGCCTT ACGACGATAC GATGCTCATC TCCTACGTCC TCGAAGCGGG CACTCAAGCC
CACGGCATGG ACGCGCTGGC CGAGCGCTGG CTGGGCCATA CGCCTGTCTC CTACAAGGAG
GTCACGGGTT CCGGGCGCTC GAAGGTCACG TTCGACATGG TCGGTCTGGA GCGTGCAACT
GTCTATGCCT CGGAGGATGC CGACGTCACG CTCAGGCTTT GGAAGGTTCT GAAGCCACAG
CTTGCCGCGA AGGGCCTCGT CTCCGTCTAT GAGCGGCTGG AGCGCCCCAT GGTATCGGTT
ATCTGCCGCA TGGAGCATCG CGGCATCATG GTCGACCGGC AAATCCTGTC ACGGATGTCC
GGCGACTTTG CGCAAACGGC CGCGGCCATG GAGGAAGAGA TATACCGGCT TGCGGGGGGC
CGGTTCACTA TTGGATCGCC CAAACAGCTT GGCGACATTC TTTTTGGGCG TATGGGCCTG
CCCGGCGGCG CGAAAACCAA ATCGGGCCAA TGGTCCACCT CCGCGCAGGT GCTGGAGGAG
CTGGCAGCCG CCGGCCACGA GCTGCCGAGA AAGATCGTGG ACTGGCGGCA AGTCACAAAG
CTCAAATCCA CCTATACGGA CGCGCTTCCG GGCTATATCC ACCCTGAGAC AGGCCGCGTC
CACACCTCCT ATTCGCTCGC TTCCACGACA ACCGGCCGCC TTTCCTCCTC CGAGCCAAAT
CTGCAGAACA TCCCGGTGCG CACACCCGAA GGGCGAAAGA TCCGCACCGC CTTCATTGCC
GCCCCCGGCT ATAAGCTGAT TTCGGCCGAT TACAGCCAGA TCGAGCTGCG CGTGCTCGCC
CATGTGGCCG ACATTCCGGA GCTGAAGAAG GCATTCGCGG AAGGTATGGA CATTCATGCC
ATGACCGCCT CCGAAATGTT CGGCGTGCCG GTGGAAGGAA TGCCAGGCGA GGTGCGCCGG
CGCGCCAAGG CCATCAATTT CGGCATCATC TACGGCATTT CGGCTTTTGG CCTCGCCAAC
CAGCTCTCCA TCCCCCGCGA TGAAGCCGGC GCCTACATCA AGCGCTATTT CGAACGCTTC
CCCGGCATCC GCGACTACAT GGAACGCACC AAGGCCTTTT GCCGCGAGAA AGGCTATGTG
GAAACCATCT TTGGCCGCCG CGCGCATTAT CCGGAGATCC GCTCATCGAA CCCGTCCGTC
CGAGCGTTCA ACGAGCGTGC CTCCATCAAC GCGCCTATCC AAGGCTCCGC TGCCGACATC
ATCCGCCGCG CCATGATGCG GATGGAGGCG GCGCTGGCCG ATTCGGGATT GGTCGACGTG
AAGATGCTTC TGCAGGTGCA TGACGAACTG GTGTTCGAAG CGCCGGAAGA CGCGATCGAG
CGGGCAATTC CGGTAATTCG CACGGTCATG GAGGGCGCGG CATGGCCCGC CCGATCGCTT
TCAGTACCGC TGAAGGTGGA CGCCCGCGCA GCGGACAACT GGGAAGAGGC GCATTAG
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| Protein sequence | MKKGDHLFLV DGSGYIFRAY HALPPLNRKS DGLPVSAVLG FCNMVWKLLR DARDTAVGVT
PTHFAVIFDY SSKTFRSKIY PEYKANRTEP PEDLIPQFGL IREATRAFDL PCIEMEGYEA
DDLIATYARL VCEAGGDTTI ISSDKDLMQL VGPTVSMYDP MKDKEIRVPE VVEKWGVPPE
KMIDLQALTG DTIDNVPGVP GIGPKTAAQL LEEYGDLDTL LSRAHEIKQQ KRRENLIEFA
EKARISRELV RLKNDVTVEM PLDALALNPP DGPKLIAFLK AMEFSTLTRR VAEATGADAA
DVEPAYIEVQ KGAEAHGPDL TVPATGIGEP GAEGEVAPER DDGAETPEKL ARKLADAASH
EAFDHSRYVC IRDLETLNQW VAEARETGVV ALDTETTSLD PMQAELCGIA LATAPNRAAY
LPLSHKNGAE DLLGGGMVDG QIRVEEALAV LRPLLQDPSV LKIGQNLKYD WVLLYRHGIE
IAPYDDTMLI SYVLEAGTQA HGMDALAERW LGHTPVSYKE VTGSGRSKVT FDMVGLERAT
VYASEDADVT LRLWKVLKPQ LAAKGLVSVY ERLERPMVSV ICRMEHRGIM VDRQILSRMS
GDFAQTAAAM EEEIYRLAGG RFTIGSPKQL GDILFGRMGL PGGAKTKSGQ WSTSAQVLEE
LAAAGHELPR KIVDWRQVTK LKSTYTDALP GYIHPETGRV HTSYSLASTT TGRLSSSEPN
LQNIPVRTPE GRKIRTAFIA APGYKLISAD YSQIELRVLA HVADIPELKK AFAEGMDIHA
MTASEMFGVP VEGMPGEVRR RAKAINFGII YGISAFGLAN QLSIPRDEAG AYIKRYFERF
PGIRDYMERT KAFCREKGYV ETIFGRRAHY PEIRSSNPSV RAFNERASIN APIQGSAADI
IRRAMMRMEA ALADSGLVDV KMLLQVHDEL VFEAPEDAIE RAIPVIRTVM EGAAWPARSL
SVPLKVDARA ADNWEEAH
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