| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3935 |
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| Symbol | |
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| ID | 4180416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | + |
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| Start bp | 4238007 |
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| End bp | 4240154 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638069829 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_676467 |
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| Protein GI | 110636259 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.138516 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAATC ATCATAAAGT GGAAATTGAA TGGGGTGGGC GGCCGCTCAT CCTGGAAACG
GGCAAGATCG CCCGCCAGGC CGACGGTGCG GTTCTCGCGA CCTACGGCGA AACTGTCGTG
CTGGCCACCG TCGTCTCGGC CAAGGAGCCG AAACCCGGGA TCGATTTCTT CCCGCTCACC
GTGAATTATC AGGAAAAGAC CTTCGCGGCC GGCAAGATCC CTGGCGGTTA TTTCAAGCGT
GAGGGGCGTC CGAGCGAGAA GGAGACGCTG GTCTCCCGCC TCATCGATCG TCCGATCCGT
CCGCTCTTCG TCGAAGGCTA CAAAAACGAC ACCCAGGTGA TCATCACCGT TCTCCAGCAC
GACCTGGAGA ACGATCCGGA CATCCTGTCC ATGGTTGCCG CTTCGGCCGC GCTGACGCTT
TCGGGTGTTC CCTTCATGGG GCCGGTAGGG GCTGCTCGCG TTGGCTATGT CGGCGGCGAG
TACATTCTTA ACCCGCACCT CGACGAAATG GCGGAGACCA AGCTGGACCT CGTCGTGGCG
GGCACTAGCG ATGCGGTGCT GATGGTGGAG TCGGAAGCTC ACGAGCTGCC CGAGGACGTG
ATGCTCGGCG CCGTGATGTT CGGGCACAGG AATTTCCAGC CGGTCATCGA CGCCATTATC
AAGCTCGCCG AAGTCGCGGC GAAAGAGCCC CGCGAATTCC TGCCTGAGGA TCTTTCCGCG
CTTGAGGCCG AGATGCTGAA GGTGGTCGAG GCTGACCTGC GTGACGCGTA CAAGATCACC
AACAAGCAAG CTCGCTACGA TGCCGTGAAT GCTGCCAAGG CAAAGGTGAA GGAAGCTTTC
CTTCCGGAAG GTGCCGAGGC ATACAAGTGG ACGCCTGAGC AGGTGGCCAC GGTCTTCAAG
GCGCTCCAGG CAAAGATCGT GCGCTGGAAC ATCCTCGACA CCGGCTCCCG TATTGACGGC
CGCGATTTGA GGAGCGTTCG CCCGATCGTC GCGGAAGTGG GCGTACTGCC CCGTACGCAC
GGCTCTGCCG TCTTCACCCG CGGGGAGACG CAGGCCCTTG TGGTCGCGAC CTTGGGTACC
GGCGAGGACG AGCAATATGT CGATTCCCTG ACAGGTACCG TCAAGGAAAC CTTCATGCTG
CACTACAACT TCCCGCCCTA TTCGGTGGGT GAGACCGGCC GCATGGGCTC TCCGGGTCGG
CGTGAGATCG GCCACGGCAA GCTCGCCTGG CGCGCGGTGC ACCCGCTGCT CCCGGCACCG
GAGCAGTTCC CCTACACGAT CCGCGTTGTG TCCGAGATCA CCGAGTCGAA CGGCTCTTCC
TCAATGGCCA CTGTCTGCGG CACCTCGCTG GCTCTGATGG ACGCGGGAGT GCCGCTTGCC
AAGCCGGTGG CTGGCATCGC GATGGGCCTC ATCAAGGAAG ACGACCGCTT TGCCGTGTTG
TCCGACATTC TCGGTGACGA GGATCATCTT GGCGATATGG ACTTCAAAGT GGCAGGCACC
GCCGAAGGCG TCACCTCGCT GCAGATGGAC ATCAAGATCA CCGGCATCAC CGAAGAGATC
ATGAAAGTCG CCCTGGAGCA GGCAAAGGAT GGCCGTTTGC ATATTCTGGG CGAAATGGCC
AACGCGCTCT CGGAAAGCCG CGGCGAGCTT GGTGAGTTCG CTCCGCGCAT CGAGGTCATG
CACATCCCGA CCGACAAGAT CCGTGACGTG ATCGGCACTG GCGGGAAGGT GATCCGCGAG
ATCGTTGAGA AGACCGGCGC CAAGATCAAT ATCGAGGACG ACGGCACGGT GAAGATCGCC
TCCAGCAATG GCAAGGAGAT CGAGGCGGCT CGCAAGTGGA TTCATTCCAT TGTCGCCGAA
CCGGAGGTGG GAGAGATCTA TGAGGGCACG GTCGTAAAGA CAGCCGATTT CGGCGCATTC
GTGAACTTCT TCGGTCCTCG GGATGGCCTG GTCCACATTT CGCAACTGGC GCCCGAGCGC
GTCCAGAAGA CCACGGATGT GGTGAAGGAA GGCGACAAGG TCTTCGTCAA GCTCATGGGA
TTTGACGAGC GCGGGAAGGT GCGCCTTTCC ATGAAGGTCG TCGATCAGGA GACCGGTAAG
GAAATCGTAC AGGAGAAGAA GGAAGAGAAG CAGGAAGCCG AAGGCTGA
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| Protein sequence | MFNHHKVEIE WGGRPLILET GKIARQADGA VLATYGETVV LATVVSAKEP KPGIDFFPLT
VNYQEKTFAA GKIPGGYFKR EGRPSEKETL VSRLIDRPIR PLFVEGYKND TQVIITVLQH
DLENDPDILS MVAASAALTL SGVPFMGPVG AARVGYVGGE YILNPHLDEM AETKLDLVVA
GTSDAVLMVE SEAHELPEDV MLGAVMFGHR NFQPVIDAII KLAEVAAKEP REFLPEDLSA
LEAEMLKVVE ADLRDAYKIT NKQARYDAVN AAKAKVKEAF LPEGAEAYKW TPEQVATVFK
ALQAKIVRWN ILDTGSRIDG RDLRSVRPIV AEVGVLPRTH GSAVFTRGET QALVVATLGT
GEDEQYVDSL TGTVKETFML HYNFPPYSVG ETGRMGSPGR REIGHGKLAW RAVHPLLPAP
EQFPYTIRVV SEITESNGSS SMATVCGTSL ALMDAGVPLA KPVAGIAMGL IKEDDRFAVL
SDILGDEDHL GDMDFKVAGT AEGVTSLQMD IKITGITEEI MKVALEQAKD GRLHILGEMA
NALSESRGEL GEFAPRIEVM HIPTDKIRDV IGTGGKVIRE IVEKTGAKIN IEDDGTVKIA
SSNGKEIEAA RKWIHSIVAE PEVGEIYEGT VVKTADFGAF VNFFGPRDGL VHISQLAPER
VQKTTDVVKE GDKVFVKLMG FDERGKVRLS MKVVDQETGK EIVQEKKEEK QEAEG
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