Gene Meso_3934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3934 
SymbolrpsO 
ID4180415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp4237485 
End bp4237754 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content58% 
IMG OID638069828 
Product30S ribosomal protein S15 
Protein accessionYP_676466 
Protein GI110636258 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0184] Ribosomal protein S15P/S13E 
TIGRFAM ID[TIGR00952] ribosomal protein S15, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.281192 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGATTA CTGCCGAGCG CAAGCAGGAG CTTTTGAAGG AATTCGCGAC TGCCAATGCT 
GACACCGGTT CGCCGGAAGT CCAGGTCGCC CTCCTCACCG AGCGCATCAA GAACCTGACC
GAGCATTTCA AGGAGCACCA GAAGGATAAC CATTCCCGTC GTGGTCTCCT CAAACTCGTC
TCGCAGCGCC GTCGTCTGCT CGACTATGTC AAGCGGAAGG ACGAGGCTCG CTACCAGGCG
TTGATCGAAA AGCTCGGGCT GCGTCGTTAG
 
Protein sequence
MSITAERKQE LLKEFATANA DTGSPEVQVA LLTERIKNLT EHFKEHQKDN HSRRGLLKLV 
SQRRRLLDYV KRKDEARYQA LIEKLGLRR