Gene Meso_3933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3933 
Symbol 
ID4180414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp4235603 
End bp4237342 
Gene Length1740 bp 
Protein Length579 aa 
Translation table11 
GC content61% 
IMG OID638069827 
Productsignal transduction histidine kinase 
Protein accessionYP_676465 
Protein GI110636257 
COG category[T] Signal transduction mechanisms 
COG ID[COG3920] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.939914 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGATCGGC AAGGTGTGGG CGACGTGGAC ACCAGCGTTA ATCGCCCTGA TGCAAAGCAC 
GGGTTCAGGC AGAAGCTGCG CGCGCGGCTG ACAGGCCCGA AATCGATCGG CTTTTATCTT
TTTTTGCTGA TCCTGGTCAC CATTGTCCCG GCGCTTGCCA TCTCGGCGGT GCTTCTGCAG
CGTAACGACG CGGCGCAGCG CGCGGTGGTC GAGACATTGG CGGAAGCTAT GGCCGGCTCC
ATAGCAGAGG CCGTGGATAG GGAACTAAGC GGCATGGTGA CCACGCTCAG GGTGCTGTCG
ACCACGCGCT CACTCACAAC CGGCAACCTG CACGACTTTT ATGAGCGCTC GAGGATGGCG
CTCGCGGGAA CCGGGTCCTA TCTCATCGTG CTTGACGGAA ATCTCAGGCA ACTTCTGAAC
ACACGTGTCC CGTTCGGCGC CTCGCTTGGA CCAACCGCAA ATCCCGCCTC GGCAAAGCAG
GCCCTTCAGA CCCGCGCTGC TGTGGTCTCC GGCGTTTTCT TCGGCCAGGT TTCGCAAAAG
TGGGTCTTCA ATGTCATCTT GCCGATCCTG CGCGAGAACC AGCCGCCGCT TCTGCTGGTG
CTGACGCGCA ATGCAGAGAC TATGGCCGAC ACGCTTTCAC AGGAAATGCT GCGCGGCGGG
TGGAATGCCT CGTTGCTTGA CCGGGAGGGG ATAGTAATTG CCTCCTCCTT CATGTCGTCC
AGCATTGGCA AGCCATTCTT CCTCGATGTC CATAACGGCC GTGAACCGCA GACCGGTCGC
ATTTCCGAAA GTGTCGACTC GCAATCCTAC GTGGCGATCG TGGATGAGTC GGCCTATAGC
GGCTGGAAAG TGGTCGTCTG GGCGCCAACG GCGGCCGTCG AGGAGCCAAC GCGACGCGCT
TTGCGATCGC TGTTCAGCAG CAGTCTGGTG ATCATAGCCA TCGGAACGCT GGCGGCCTGG
CTGATCGGGC GGCAAATTGC CCGGTCCATC CGCCGCCTCG CCTATGATGC ACGAAGATTG
GGCGCCGGAC AGGCGGTGGA TGCCGTGCGC TATCCAATCG CCGAGGTGGC AACGGTTTCC
GCGGCGCTTT CGGAGGCGGC AACCGATCGG AAAACCGCGG AAAATGAGAT CCGGCTTCTC
ATGCGCGAGG TGGCTCACCG GGCTAAAAAT CAGCTCACCG TGGTCTCATC AATGGCAAAG
CAGACGGCCC GCAGTTCGCG CTCCCTGCCG GTCTTCCTCG ATTCGTTCCA GAAGCGCCTT
TATGGCCTTG CGCGTTCGAC AGATCTTCTC ATCGCAGGCG GCGCCACCGG TGTGGAGCTG
CGCGAATTGC TGATGGCGCA AATCGAGCCC TTCCGGCCCG AGGATATGAA GCGGCTCGAT
ATTTCGGGCC CTCCTTTCCG TCTTTCCAAT CAGGCGGCGC AAACCATCGG CCTTGCCGTG
CACGAGCTGG CGACGAATGC CGCCAAATAT GGTGCTTTCG GTGCGCGGAC GGGCCGATTG
TCGGTCACCT GGACAATCGA CGGAGAGGTG CTGGTTCTCA CCTGGCGCGA ACATCTCACG
CTGCTGCGGC GGCGGTCGAT GCGGCGCGGT TTCGGCACGG AGATCATCGA GCGCATGTTG
GGGGGCACGC TTGACGCGGA GATATCGCGT ACGTTTCATC GCGACGGCCT CGAATGCATT
TTTCGCATCC CGTTGAAGCG CCTCGCACCC GAGCGGACGC AACCCGCCTC GCCCTTCTGA
 
Protein sequence
MDRQGVGDVD TSVNRPDAKH GFRQKLRARL TGPKSIGFYL FLLILVTIVP ALAISAVLLQ 
RNDAAQRAVV ETLAEAMAGS IAEAVDRELS GMVTTLRVLS TTRSLTTGNL HDFYERSRMA
LAGTGSYLIV LDGNLRQLLN TRVPFGASLG PTANPASAKQ ALQTRAAVVS GVFFGQVSQK
WVFNVILPIL RENQPPLLLV LTRNAETMAD TLSQEMLRGG WNASLLDREG IVIASSFMSS
SIGKPFFLDV HNGREPQTGR ISESVDSQSY VAIVDESAYS GWKVVVWAPT AAVEEPTRRA
LRSLFSSSLV IIAIGTLAAW LIGRQIARSI RRLAYDARRL GAGQAVDAVR YPIAEVATVS
AALSEAATDR KTAENEIRLL MREVAHRAKN QLTVVSSMAK QTARSSRSLP VFLDSFQKRL
YGLARSTDLL IAGGATGVEL RELLMAQIEP FRPEDMKRLD ISGPPFRLSN QAAQTIGLAV
HELATNAAKY GAFGARTGRL SVTWTIDGEV LVLTWREHLT LLRRRSMRRG FGTEIIERML
GGTLDAEISR TFHRDGLECI FRIPLKRLAP ERTQPASPF