| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3932 |
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| Symbol | truB |
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| ID | 4180413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | + |
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| Start bp | 4234594 |
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| End bp | 4235532 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638069826 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_676464 |
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| Protein GI | 110636256 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.138388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCGTC GCGGAAAGAA AAAGGGCCGA GCCGTCTCGG GCTGGCTGGT GCTGGACAAG
CCGGCCGGGC TTGGTTCCAC GGAGGCTGTC TCCAAGGTGA AATGGCTGTT CGGCGCACAG
AAGGCTGGAC ATGCCGGCAC ATTGGACCCG CTCGCCTCCG GCATGTTGCC CATCGCTCTT
GGCGAGGCCA CGAAGACCGT TCCCTATGTC ATGGAAGGGG CGAAGGTCTA CCGGTTCACG
GTCGCTTGGG GTGAGGAACG CTCGACGGAC GATCTTGAGG GACCGGTGAC AAAGTCCTGT
GACAAGGTGC CTGTGGAAGA GGACATACGA GCGCTCCTGC CGCGGTACAC GGGGCTGATC
ATGCAAACGC CGCCCCAATT CTCCGCCGTG AAGATCGGTG GGGAACGCGC CTATGATCTG
GCGCGAGAAG GCGAGGTGGT GGAAATTGCA GCGCGCGAGG TGGAGATCGG GCGGCTCGAT
CTCATTTCGA TTCCCGAACC GAAAAAGGCC GTGTTCGAAG TGGAATGCGG CAAGGGGACC
TATGTCCGCT CGCTCGCCCG CGATATGGGC CGCGATCTAG GCTGTTTCGG GCATGTCGCC
GATCTCCGGC GCACAGAAGT CTACCCATTC GAGACGCAAC AATTGGTGCC GCTGAAGGAT
TTGGAAGGCG CCGCAGCCGA TGCGGAAACG GAAAGCGATC GATTTTCTGC CCTGGACTCC
TATCTTCTCG ATACGGAAGC GGCCCTCGAC GGATTACCCG AAATCGTCCT GGGCGATGAT
GCGGCAGGCC GTATCCGGCT TGGGAATCCG GTGATCGTGC GCGGCCGGGA CGCTCCGGTA
CAGGCGCCGG AAGCTTGGGC CAGCCTGCGC GGCCGTTTGA TCGCGATCGG CATGGTGGAG
GCCGGCATGT TCAAGCCGAA AAGGGTTTTT GGGCTCTAA
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| Protein sequence | MARRGKKKGR AVSGWLVLDK PAGLGSTEAV SKVKWLFGAQ KAGHAGTLDP LASGMLPIAL
GEATKTVPYV MEGAKVYRFT VAWGEERSTD DLEGPVTKSC DKVPVEEDIR ALLPRYTGLI
MQTPPQFSAV KIGGERAYDL AREGEVVEIA AREVEIGRLD LISIPEPKKA VFEVECGKGT
YVRSLARDMG RDLGCFGHVA DLRRTEVYPF ETQQLVPLKD LEGAAADAET ESDRFSALDS
YLLDTEAALD GLPEIVLGDD AAGRIRLGNP VIVRGRDAPV QAPEAWASLR GRLIAIGMVE
AGMFKPKRVF GL
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