| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3910 |
|---|
| Symbol | |
|---|
| ID | 4181882 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 4210795 |
|---|
| End bp | 4211589 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638069802 |
|---|
| Product | carboxymuconolactone decarboxylase |
|---|
| Protein accession | YP_676442 |
|---|
| Protein GI | 110636234 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.984224 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGAG CTGCACTTGC TTTCGCGCTT GCGTTCGCCG GAGCAACACA CGCCCAGGCC
CAGTCACAAC CGCCCACCGA TCAACAGGCG CAACCGCAGC AGGGGACGCA GCAGCAGAAC
CAGACGCGTC CATCGGGTCC GCTTCAGCAG AAGCTCGTGC CGGGAATGGC CAGATACACC
GACGAGGTGC TGTTCGGTGA GATATGGCCA GGAGAGGGTC TTTCGCCGCG TGACCGCAGC
CTCGCCGTTA TTTCAGTCCT GATCGCCACC AACAAGCCGG CGCAGCTTCG CGGCCATCTC
GGTCGTGCAT TGACCAACGG GGTCACGCCC ATGGAAGCGT CGGGCGTCCT GACCCACCTT
GCCATTTACT CGGGCTGGCC GAATGCGGTC TCGGCGCTCG AAGTGTATGA TGAGGTCTAC
ACCGAGCGGG ATGTGGATTT CGCTGCGCTT CAAGCGGAGC TTGAGCCGCT TTCGTCTTCC
TCTGAGACCG ATGACGCGGC AAACGCACAG CTCGAAGCCG TCGCGCCGAA GTTCGCGGAC
CTTACCGATC GGATTGTCCA CGGCGACCTC TGGTCCCGGC CTGACCTGAG CGTTCGCGAT
CGCAGCCTCG TCACGATCGC TGCCCTCACC GGCACAGGCG ATATCGACCT GATGGAGCCG
TATTTGCGTC GCGGCATAGA GGCCGGGCTT ACTCGCGACG AGATCGCGGA AGCTCTGACG
CATCTCGCCT TTTACGCCGG CTGGGGGAAG GCCACCAAGG CTTTGACGGT CGTAACCGAG
ACCTTGGGGG GCTGA
|
|---|
| Protein sequence | MKRAALAFAL AFAGATHAQA QSQPPTDQQA QPQQGTQQQN QTRPSGPLQQ KLVPGMARYT
DEVLFGEIWP GEGLSPRDRS LAVISVLIAT NKPAQLRGHL GRALTNGVTP MEASGVLTHL
AIYSGWPNAV SALEVYDEVY TERDVDFAAL QAELEPLSSS SETDDAANAQ LEAVAPKFAD
LTDRIVHGDL WSRPDLSVRD RSLVTIAALT GTGDIDLMEP YLRRGIEAGL TRDEIAEALT
HLAFYAGWGK ATKALTVVTE TLGG
|
|---|
| |