Gene Meso_3857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3857 
Symbol 
ID4182448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp4158624 
End bp4159976 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content67% 
IMG OID638069749 
Productconjugal transfer protein TrbL 
Protein accessionYP_676389 
Protein GI110636181 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3846] Type IV secretory pathway, TrbL components 
TIGRFAM ID[TIGR02783] P-type conjugative transfer protein TrbL 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0260483 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGGGCG CTGGCGTCAT CGACCGCTTC TTGCAGGTCT TCACGACCTA CATCGATTCC 
GGCTTCGGTC TGCTCGGCGG TGAGGTGGCG TTCATTGCGA CCACGCTCAT CGTGATCGAC
GTGACGCTGG CCGCCCTGTT CTGGGCATGG GGAGCTGATG ACGACGTTCT CGCGAAGTTC
ATCAAAAAGG TCATTTTCGT CGGCGTGTTC GCCTACCTGA TCAGCAACTG GCAGACCCTC
GCTCAGATCG TGTTCGACAG CTTCGCCGGC CTCGGGCTGC AAGCCTCCGG CACGGGGTTT
TCGACCGCGG ACCTCATGCG GCCAGGTCGT GTCGCGCAGA CCGGACTCGA CGCCGGCCGT
CCGCTGCTCG AATCCATCTC TGATCTCATG GGCTATTGGT CGTTCTTCGA GAACTTCCTG
CAAATCATCT GCCTGCTCTT CGCATGGGCA CTCGTGCTGC TCGCTTTCTT CATCCTGTCG
ATCCAGCTCT TCGTCACGCT GATCGAGTTC AAGCTGACGA CGCTCGCCGG CTTCGTCCTC
ATCCCGTTCG GGCTATTTGG GCAGAGTGCA TTCATGGCCG AACGCGTTCT GGGCAACGTC
GTCAGCTCCG GCATCAAAGT GTTGGTCCTC GCCGTCATCA TTGGCATCGG CTCGACACTC
TTCGGTGAGT TCACGGCCGG CTTCGGCGGC GAGCAGCCGA CCGTCGACGA CGCGATGGCA
ATCGTGCTGG CGGCGCTCTC CCTTCTCGGC CTCGGCATTT TCGGGCCAGG AATCGCGAAC
GGCATCGTCA GCGGCGGACC GCAGCTCGGT GCGGGCGCGG CCGTAGGGAC CGGCCTTGCC
GTCGCCGGCG CAGGGGTCGC GGCAGGTGGC GGGGCGATGC TCGCCGCGCG CGGCGGGGCA
GCCGCCCTCT CTGGTGGCGC GGCCGTCGCA CGTGGAGGAG CCGCCGCCGC AGGCGGCGCC
GCGACGGCCT ACTCGCTCGG CTCGGCCGGA CAAAGTGGAG CAGCCGGCGT CGCATCTGGC
CTCGGCGGCG TCGCCCGCGC CGGCGGCAGC GCCACGATGG CACCCGTGAA GCGCGCAGTA
TCCCGCGCCT CGGAGTCCAT GCGCTCGTCC TACGCCGCCG GCGGTCGGTC CGCGGCGGCC
ATGACCGGCG GCAGTTCCTC GATGGGAACG ATCGGCGGTG AGCCCGAGGC TGCCGCTTCC
TCGACCACGG GAGGTCCGCC CGCCTGGGCC CAGCGCATGC GCCGCAGCCA GACGATGAGC
CATGGGGTCT CCGCCGCCGC CCATGCCGTC CGTTCCGGCG ATAGCCACGG CGGCGGTGCT
TCCATCAGCC TTTCGCAGAG TGACCGCACA TGA
 
Protein sequence
MEGAGVIDRF LQVFTTYIDS GFGLLGGEVA FIATTLIVID VTLAALFWAW GADDDVLAKF 
IKKVIFVGVF AYLISNWQTL AQIVFDSFAG LGLQASGTGF STADLMRPGR VAQTGLDAGR
PLLESISDLM GYWSFFENFL QIICLLFAWA LVLLAFFILS IQLFVTLIEF KLTTLAGFVL
IPFGLFGQSA FMAERVLGNV VSSGIKVLVL AVIIGIGSTL FGEFTAGFGG EQPTVDDAMA
IVLAALSLLG LGIFGPGIAN GIVSGGPQLG AGAAVGTGLA VAGAGVAAGG GAMLAARGGA
AALSGGAAVA RGGAAAAGGA ATAYSLGSAG QSGAAGVASG LGGVARAGGS ATMAPVKRAV
SRASESMRSS YAAGGRSAAA MTGGSSSMGT IGGEPEAAAS STTGGPPAWA QRMRRSQTMS
HGVSAAAHAV RSGDSHGGGA SISLSQSDRT