| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3855 |
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| Symbol | |
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| ID | 4182446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | + |
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| Start bp | 4157568 |
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| End bp | 4158329 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638069747 |
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| Product | conjugal transfer protein TrbJ |
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| Protein accession | YP_676387 |
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| Protein GI | 110636179 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5314] Conjugal transfer/entry exclusion protein |
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| TIGRFAM ID | [TIGR02780] P-type conjugative transfer protein TrbJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00466031 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCGAA ATTCCGCCTG CCGGATCGTC GGCGTGAGCG CCATCGCCAT CACACTTGCA
GCCCCGCTTG CACTTGCGCC GGTCGTTTCG ACGCCGGCTC ACGCGCAGCT CTTCGGCTTC
GGCCGGATCG TCTTCGATCC GACCAACTAC GCCGAAAACC TTCTCACGGC GGCGCGCTCT
CTTGAGCAGA TCAACAACCA GATCCAGTCG CTTCAGAACG AAGCGCAGAT GCTCATCAAC
CAGGCCCGTA ATCTTGCCAG CCTGCCGCAC TCCTCGCTCC AGCAGCTCCA GCAGGCTGTC
TCGCGCACCC AGCAGCTTCT CGGCGAGGCG CAGCGTATCG CTTTCGACGT CCGCGAGATC
GACCAGATCT TCGACAATCA ATACGCCAAT GTCGATCTCT CGATGACGGA CCGGCAGCTC
GTCGATCAGG CGCGAGATCG CTGGGGGAAC ACGGTCGGCG CGCTTCAGGA CGCCATGAGG
GTGCAGGCGG GCGTCGTTGG CAATATCGAC GCCCAGCGGA CCGAGATGTC CGCCCTCGTC
GGGCAGAGCC AGAACGCGGT CGGCGCGCTT CAGGCGACCC AGGCCGGCAA CCAGCTTCTC
GCGCTTCAGG CGCAACAGCT CGCCGACCTC ACCGCCATGC TCGCAGCCAA CGGCCGTGCC
ACCGCTCTCG TCGATGCCGA ACGCGCGGCT GCCGCCGAGC AGGGGCGCGT CCAGCGGCAG
CGGTTCCTCA CCCCCGGCCC CGGCTACCAG CCGGGCAACT AG
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| Protein sequence | MTRNSACRIV GVSAIAITLA APLALAPVVS TPAHAQLFGF GRIVFDPTNY AENLLTAARS
LEQINNQIQS LQNEAQMLIN QARNLASLPH SSLQQLQQAV SRTQQLLGEA QRIAFDVREI
DQIFDNQYAN VDLSMTDRQL VDQARDRWGN TVGALQDAMR VQAGVVGNID AQRTEMSALV
GQSQNAVGAL QATQAGNQLL ALQAQQLADL TAMLAANGRA TALVDAERAA AAEQGRVQRQ
RFLTPGPGYQ PGN
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