Gene Meso_3853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3853 
Symbol 
ID4182444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp4154787 
End bp4155068 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content70% 
IMG OID638069745 
Productconjugal transfer protein 
Protein accessionYP_676385 
Protein GI110636177 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5268] Type IV secretory pathway, TrbD component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0395049 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGGGC TCGGAGATCA TACCGGGCCG ATCGCCGGCT TCTTCGCTCC GGTTCACCGC 
TCGCTGACCG AGCCGATTCT GCTGGGCGGC GCGCCGCGCG CCGTCGCCAT CGCCAACGGC
ACCATCGCCG CAGCGATCGC GCTTGGGCTG CGCCTGTGGC TCGCCGGTCT GGTGATCTGG
GCGATCGGGC ATTTCGCCGC CGTATGGGCG GCGCGGCGTG ACGCCCAGTT CATGGACGTG
ACCCGCCGGC ACCTCCGCTA TCCGTCCTTC ATGCGCGCGT GA
 
Protein sequence
MNGLGDHTGP IAGFFAPVHR SLTEPILLGG APRAVAIANG TIAAAIALGL RLWLAGLVIW 
AIGHFAAVWA ARRDAQFMDV TRRHLRYPSF MRA