Gene Meso_3779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3779 
Symbol 
ID4180984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp4082722 
End bp4083546 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content62% 
IMG OID638069672 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_676312 
Protein GI110636104 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.639619 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCGCG CAGTTTCCAC CCGAAGGAAG ACCATCGCCA CGATCGCTGC CTGGCTGGTC 
GCCCTCGTGA TCTTTTTCCC GATCCTTTAC ACGGTGGCCA TCAGCTTCAA GACGGAAGCC
GAGGCCATCT CCGGCATCAG CCTCATTCCC TCCGGCACGT TCGAGAACTA TGTCCAGGTG
CAGACGCAGC GGGACTATTT CAAGCCGTTC ATGAACTCGG TGGTGATCTC CGTCGGCTCG
ACGGTGATCG CCCTCCTGAT CGGGATTCCC GCCGCCTGGT CGATGGCCTT TTCGCCGACC
AAGCGCACCA AGGACGTGCT CATGTGGATG CTCTCCACCA AGATGATGCC GGCCGTCGGC
GTGCTCGTGC CGCTTTACCT CATGTTCCGC GATTTCGGGC TGCTCGATAC GCGCATCGGC
TTGACGGTGG TCTTCACGCT CATCAACCTG CCCATCGTGG TGTGGATGCT CTATACCTAT
TTCCGCGAGA TTCCGGGTGA GATCCTGGAA GCCGCGCGGA TGGATGGGGC GAGCCTTGTG
GGCGAGATCG TCTACGTGCT GACGCCGATG GCCGTGCCGG GCATCGCGTC CACCCTGCTT
CTGAACATCA TTCTGGCCTG GAACGAAGCC TTCTGGTCGA TCCGCCTGTC CGCCGCTAAC
GCCGCTCCGC TGACGGCCTT CATCGCCTCC TTTTCTAGCC CGCAGGGGCT GTTCTGGGCC
AAGCTTTCCG CCGCCTCGAC GCTCGCGATC GCGCCCATCC TCATCATGGG CTGGTTCTCG
CAACGTCAGC TCGTGCGCGG CCTCACTTTC GGGGCGGTGA AATGA
 
Protein sequence
MARAVSTRRK TIATIAAWLV ALVIFFPILY TVAISFKTEA EAISGISLIP SGTFENYVQV 
QTQRDYFKPF MNSVVISVGS TVIALLIGIP AAWSMAFSPT KRTKDVLMWM LSTKMMPAVG
VLVPLYLMFR DFGLLDTRIG LTVVFTLINL PIVVWMLYTY FREIPGEILE AARMDGASLV
GEIVYVLTPM AVPGIASTLL LNIILAWNEA FWSIRLSAAN AAPLTAFIAS FSSPQGLFWA
KLSAASTLAI APILIMGWFS QRQLVRGLTF GAVK