| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3778 |
|---|
| Symbol | |
|---|
| ID | 4180983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | + |
|---|
| Start bp | 4081839 |
|---|
| End bp | 4082711 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638069671 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_676311 |
|---|
| Protein GI | 110636103 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTACCC GACAGACACG TACCCTAGCC CGCGCGATGA TGGCGCCCGC GGTCGTCCTG
CTTCTCGTCT GGATGATCGT GCCGCTGGCG ATGACCCTGT GGTTCTCGTT CCAGAATTAC
AATCTGCTGA ACCCGATCAC CCGCGGCTTC GCCGGCTTCC TCAATTATGA GTTCTTCTAC
ACCGATCCCG CGTTCTTCCA GTCGATCGCC AACACGCTGA TCATCGTCGG CGGGGTCCTC
GCCATTACCG TGATCGGCGG TATCCTGCTG GCTCTGCTGC TCGATCAGCC GATCTTCGGC
CAGGGCATCG TGCGCATCCT GGTGATCTCG CCCTTCTTCG TCATGCCGCC GGTCGCGGCG
CTGGTGTGGA AGAACATGAT CATGCATCCG GGCTACGGGG TTCTCGCCGA CATCGCCAGA
TTTCTCGGTC TTCAGCCCGT TGACTGGTTC GCGCAGCATC CGCTTTTCTC GATCGTCATC
ATTGTCGCCT GGCAGTGGCT GCCCTTCGCC ACGCTGATCC TGCTCACCGC GCTGCAGTCG
TTGGACGAGG AGCAGAAGGA GGCCGCGGAG ATGGACGGCG CCAACGTCTT CAACCGTTTC
CTGTATCTGA CGCTGCCTCA TCTGGCGCGG GCGATCACGG TCGTCATCCT AATCCAGACG
ATCTTCCTGC TCGGCGTCTA TGCAGAAATC CTCGTCACCA CCAATGGCGG ACCGGGCTAC
GCGACCACGA ATCTCGCCTT CCTGATCTAC CGCACGGCGC TCCTTTCCTA CGATGTCGGC
GGCGCGTCGG CCGGCGGTGT GATTGCGGTG GTCCTCGCCA ACATTGTCGC GCTGTTTCTC
ATGCGCGCCG TGGGCCGCAA CCTGGACCGA TAG
|
|---|
| Protein sequence | MATRQTRTLA RAMMAPAVVL LLVWMIVPLA MTLWFSFQNY NLLNPITRGF AGFLNYEFFY
TDPAFFQSIA NTLIIVGGVL AITVIGGILL ALLLDQPIFG QGIVRILVIS PFFVMPPVAA
LVWKNMIMHP GYGVLADIAR FLGLQPVDWF AQHPLFSIVI IVAWQWLPFA TLILLTALQS
LDEEQKEAAE MDGANVFNRF LYLTLPHLAR AITVVILIQT IFLLGVYAEI LVTTNGGPGY
ATTNLAFLIY RTALLSYDVG GASAGGVIAV VLANIVALFL MRAVGRNLDR
|
|---|
| |