Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_3777 |
Symbol | |
ID | 4180982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | + |
Start bp | 4080431 |
End bp | 4081741 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638069670 |
Product | extracellular solute-binding protein |
Protein accession | YP_676310 |
Protein GI | 110636102 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.253936 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAATAT CAGTTTTTGT GCTCGGGCTG GCCTCTGCCG GCCTTATGAC CTCCACCGCC AATGCCGAAA CGCTGACGAT CGCCACCGTT AATAATGGCG ATATGATCCG CATGCAGAGG CTCGCGAACG ATTTCACGTC CAAGAACCCC GATATCGATC TCCAGTGGGT GACGCTGGAG GAGAATGTGC TGCGCGAGCG CGTCACGACC GATATCGCCA CCAAGGGCGG GCAGTATGAC GTGATGACCA TCGGTACCTA CGAGGTGCCG ATCTGGGCAA AGCAGGACTG GCTCCTGCCG CTCGACAATC TCGGGGAAGG TTACGATACG GATGACCTTC TGCCGGCCAT CCGCAGCGGC CTTTCGGTTG ACGAAACGCT CTATGCGGCA CCCTTCTACG GCGAAAGCTC CTTCATCATG TACCGCAAGG ATTTGATGGA GAAGGCGGGC CTCACAATGC CGGAAGCGCC GACCTGGGAC TTCGTCGCCG ATGCCGCGCG CAAGATGACG GACCGCAATG CGGAGATCAA CGGCATCTGC CTGCGCGGAA AGGCGGGATG GGGCGAGAAC ATGGCTTTCC TCACCGCCAT GTCCAATAGC TTTGGAGCAC GCTGGTTCGA TGAAAACTGG CAGCCGCAAT TCGACCAGCC GGAGTGGAAG GATACGCTGC AGTTCTACGT GGACCTGATG AAGGACGCCG GGCCGTCCGG GGCTTCCTCC AACGGCTTTA ACGAGAACCT GGCGCTGTTC CAGCAGGGCA AGTGCGGCAT GTGGATCGAC GCCACTGTGG CCGCTTCCTT CGTCTCGGAT CCCGAGGACA GCACCGTGGC CGATCAGGTG GGCTACGCAC TTGCGCCGGA CAAGGGGCTT GGCAAGCGCG CGAACTGGCT GTGGGCCTGG TCGCTGGCCG TACCGGCCGG TACGCAAAAG GCGGAGGCCG CGCAGAAGTT CATCTCCTGG GCGACGAGCA AGGAATATCT CCAGCTCGTG GCTTCCGAGG AGGGCTGGGC CAATGTGCCT CCAGGTACAC GCACCTCGCT CTATGAGAAC CCGGAATATC AGGAGGCCGC GCCCTTCGCG GATCTGACGC TCAAGTCCAT CGAAGCCGCC GATCCGACCA ATCCGACGGT CAAGCCCGTG CCTTATGTGG GCGTGCAGTT CGTGGCGATC CCGGAATTCC AGGGGCTCGG CACCACGGTG GGCCAGCTCT TCTCTGCCGC GCTCGCCGGC CAGATGTCGG TCGACGACGC GCTTGCCCAG GCGCAGAACG TGTCCGAACG TGAGATGAAA CGCGCCGGCT ACATCAAATA A
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Protein sequence | MRISVFVLGL ASAGLMTSTA NAETLTIATV NNGDMIRMQR LANDFTSKNP DIDLQWVTLE ENVLRERVTT DIATKGGQYD VMTIGTYEVP IWAKQDWLLP LDNLGEGYDT DDLLPAIRSG LSVDETLYAA PFYGESSFIM YRKDLMEKAG LTMPEAPTWD FVADAARKMT DRNAEINGIC LRGKAGWGEN MAFLTAMSNS FGARWFDENW QPQFDQPEWK DTLQFYVDLM KDAGPSGASS NGFNENLALF QQGKCGMWID ATVAASFVSD PEDSTVADQV GYALAPDKGL GKRANWLWAW SLAVPAGTQK AEAAQKFISW ATSKEYLQLV ASEEGWANVP PGTRTSLYEN PEYQEAAPFA DLTLKSIEAA DPTNPTVKPV PYVGVQFVAI PEFQGLGTTV GQLFSAALAG QMSVDDALAQ AQNVSEREMK RAGYIK
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