Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_3774 |
Symbol | |
ID | 4180979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | + |
Start bp | 4078137 |
End bp | 4078925 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638069667 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_676307 |
Protein GI | 110636099 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGCGCA CGAAACACTC TACAGTCTTG ATCCCGGACC TGGCCGGCAA GGTCGTCCTC GTCACCGGCG CGTCGACCGG CATAGGAGCG GCTGTCGCAC GCGCTTTCGC CGAGCAGGGC AGTTCCGTGG GAATCCACTA CAATACAAGC GCCGCCGAGG CCTCGGCGCT CGCGGAAGAC ATCGCCGTTG GCGGCGGCAA GACTTTCCTC GTCAGAGGCG ATGTTTCTGT TCCGGATGAG ATGCGTCGGA TCGTGGATGA GACGGCAAAC CATTTCGGGA GGCTCGATGG GCTGGTCAAC AATGCCGGCA GCATGCTCGG CCGCATCCTC TATGCGGACG TGACCGAAGA GCATTACGAC GCCGTCATGG ATCTCAATGC AAAATCCGTT CTCGTGGCGT GCCGCGCCGC TCTCCCATGG CTGCGGAAGA ACGGGGGCTT CATTATCAAT ACATCCTCGA TCGTTGCGCG CACCGGGGGC GGAGGCGGAG TCGGGCTCTA CGCCTCCAGC AAAGCTTTCG TATCGAGTTT TACCCGTGGC CTCGCCCGCG AAGTGATCTC CAGCGGCATT CGCGTGAACG CGGTATCCCC GGGGGTAATC GAGACGCGGT TCCATGAACG GGACTCGACG CCTGAACAGC TTAAGGCCGC GCTGGCCACC ATTCCGCAAG GCCGCCTTGG AGCGCCGTCG GATTGCGTTG GTTCTTTCCT ATTCCTCGCT TCTGACTTGT TGAGCGGCTA CATCACCGGT CAAACGATCG AGGTGAATGG CGGTCAGGCA ATGCCGTAG
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Protein sequence | MERTKHSTVL IPDLAGKVVL VTGASTGIGA AVARAFAEQG SSVGIHYNTS AAEASALAED IAVGGGKTFL VRGDVSVPDE MRRIVDETAN HFGRLDGLVN NAGSMLGRIL YADVTEEHYD AVMDLNAKSV LVACRAALPW LRKNGGFIIN TSSIVARTGG GGGVGLYASS KAFVSSFTRG LAREVISSGI RVNAVSPGVI ETRFHERDST PEQLKAALAT IPQGRLGAPS DCVGSFLFLA SDLLSGYITG QTIEVNGGQA MP
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