Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_3771 |
Symbol | |
ID | 4180976 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | + |
Start bp | 4074890 |
End bp | 4076155 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638069664 |
Product | extracellular solute-binding protein |
Protein accession | YP_676304 |
Protein GI | 110636096 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAGCA TTAGGTCTAA ATTCTTGATC GCTGCGGGCC TTGCGGCATT CATGGGAGGC ATGGCCTTGC CTGCCCATGC GCAGCAGACT GAAATAGTGC TCTGGGACAT CCAGCAGCCG GGCGACGGTT CCCCACGGGG CGAGGCATTT AAAAAGAACC TGGAGGCCTT CGAAGCCCAA AATCCGGACA TCAAGGTGCG GGTCGAGATA ATTCCGCCTC CCCTGCTGGA TCCCAATCTG ATCCAGAGCG CTTCGGCGGG CAATTCTCCC GACGTGACCC GTGTCTTCAA CATCTATCTG CAGCGGCACG TGGCGGCGGG ATCGATCCAG CCGCTGGATC AGTACATGAC GGAAGCCGAC AAGGAAGGAT GGCTTTTGCC CTGGGACAAG TCGGGCGTGG TCGACGGCAA GAAATATGGC ATGCCGCTTG AGTACCGGTT CAGCGCGATG CTTTACAGGA AGGATCTTCT CGATCCCGCC GGCGCGCAGG TCCCCAAGAC CTGGGACGAG GTTTGTTCTG AGGCGAAGAA GGTGACAAGC CCCAAGGTGA TGGGTTTCAG CTTTGGCATC TCGGAAAGCG ATCAGGCCAA CATCCTCAAC GAGTTGATGG AGACCTACTT CCTCAATGCC GGCGGCCGCC TCTTCGGCGA GGACGGCAAG GTGAACCTCG ACCGGAATAT TGGCGTGGGG TTCCTCGCCA CACTCAAGCG TCTCGTCAGT GAATGCAATG CTGCGACACC GGCCGTGGTC GAGACCACCT ACAATACCGT AACCGAGGGT CTCGCCGCCG GCACGATCGG CATGGGCATG ATCGGCACTC ACCGCTTCTC GACGATTGCG GCCAAGGGCG CTGGGGACAA TCTGGGATGG GCACCTCCGC CCACCGTGGA ACCCGGCAAG GAAGGCGAAG TCAATGTGCG CGGCTGGCTC CTGTCCATGG GCGTAAACGC AAAGCATCCC GACGAGGCTG CGCGTTTCAT CAGGTTCATG ATGTCAAAGG AAGCGCAGCT AAACATCGCT CAGGGCGGGG AACTCCCCAC CAGGCTCGAA GCCTACGACG ATCCATGGTT TGAGCAGCCC GAGGCCGCGG CGGTCGTTGC CTGGAAAGAC TACATCACCA AGCACGGCGT GGTAAGCAAT TACCCGGACA ATTTCGTCGA GCTCAGCCAA TTGATGGCGC AGGCGGCCCA GCAGGTCATC CTGAATGACG TATCGCCTGA AGATGCGTTC GACAGCGTGA CGAAGCAGTA CCAAGCTCCG TACTAG
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Protein sequence | MQSIRSKFLI AAGLAAFMGG MALPAHAQQT EIVLWDIQQP GDGSPRGEAF KKNLEAFEAQ NPDIKVRVEI IPPPLLDPNL IQSASAGNSP DVTRVFNIYL QRHVAAGSIQ PLDQYMTEAD KEGWLLPWDK SGVVDGKKYG MPLEYRFSAM LYRKDLLDPA GAQVPKTWDE VCSEAKKVTS PKVMGFSFGI SESDQANILN ELMETYFLNA GGRLFGEDGK VNLDRNIGVG FLATLKRLVS ECNAATPAVV ETTYNTVTEG LAAGTIGMGM IGTHRFSTIA AKGAGDNLGW APPPTVEPGK EGEVNVRGWL LSMGVNAKHP DEAARFIRFM MSKEAQLNIA QGGELPTRLE AYDDPWFEQP EAAAVVAWKD YITKHGVVSN YPDNFVELSQ LMAQAAQQVI LNDVSPEDAF DSVTKQYQAP Y
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