Gene Meso_3729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3729 
Symbol 
ID4180718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp4024877 
End bp4025791 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content57% 
IMG OID638069622 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_676262 
Protein GI110636054 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.493793 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGAACG TCTTTCCCCC ACCGTCTCAC GGACCCCTTT GGGCAAACGA GCCCAAGCGG 
CTGCCCAACT GGGTTGAACT AATACGAAAC TACCCGTTTG GGGTCGTCGG TCTGCTGGTT
CTGGTTATCA TCTTTGTCGC TTCGGGACTG GCGCATTGGA TCGCGCCGTA TGATCCCCTG
GAAACAAACT ACGCCAACAC CTTAGCGGCG CCATCCTTGC AACACTGGCT GGGAACCGAC
ACTTTTGGGC GCGATCTCTT GAGCCGCGTG CTCTATGGTG GGCGCACCGC ACTATTTATC
GGCGTTTCGG CGAGCATTAT CGGCTCCACC ATCGGCGCGA TGCTCGGCAT TACGTCCGCC
TATATCGGGG GGTGGTTCGA GCTCATACTC GAACGTTTTC TCGAAGTGCT TCTCGCAATT
CCAACCATGA TTCTCGCCCT CGTACTTGTG GCAACGATGG GCCGGAATCT TGTGTTCGGC
ATCGATTTCA ATCTCGTACT GGCGATCGCG CTGCCAATCG TGCCCAACAT GGCAAGGATC
GCGCGCAGCC AGACCTTGAC GATCCGGCGG CAAGCTTATG TCGATGCCGC GCGCACGCTG
GGATTTTCTT CCTCACGCAT CATAGCCTGG CACATTGCGC CCAATATTGC GGGTCCCTAC
ATCGTTATGG TCACGACCTT CGTAAGCCAA GCCATCCTGA TCGAAGCCTC ACTTTCCTAT
CTTGGGTTGG GCGTGACCGC ACCAACGGCA AGCTGGGGAC TGATGTTGGC GGGCAACGCG
TTCAACAGCG CCTTGACCGC ACCCTGGATC GTCATTTTCC CAGGGGTGGC GATCGCTTTG
GTCGTCTTCT CCTTTTCCAT GCTGGGTGAT GCGCTGAGGG ATATTTTCGA TCCCAAGGCC
AGCGCCGGGC GCTAG
 
Protein sequence
MRNVFPPPSH GPLWANEPKR LPNWVELIRN YPFGVVGLLV LVIIFVASGL AHWIAPYDPL 
ETNYANTLAA PSLQHWLGTD TFGRDLLSRV LYGGRTALFI GVSASIIGST IGAMLGITSA
YIGGWFELIL ERFLEVLLAI PTMILALVLV ATMGRNLVFG IDFNLVLAIA LPIVPNMARI
ARSQTLTIRR QAYVDAARTL GFSSSRIIAW HIAPNIAGPY IVMVTTFVSQ AILIEASLSY
LGLGVTAPTA SWGLMLAGNA FNSALTAPWI VIFPGVAIAL VVFSFSMLGD ALRDIFDPKA
SAGR