| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3686 |
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| Symbol | |
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| ID | 4180870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 3973607 |
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| End bp | 3975229 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638069579 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_676219 |
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| Protein GI | 110636011 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | [TIGR02456] trehalose synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.12163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGACT ATTGGTGGAA GGATGCCATC GTCTACGCAG TGGATGTAGA GCGGTTCTGT
GATTCGGATG GTGACGGGGT AGGAGACTTC AAGGGGCTCA CGTCTAAGCT GGACTATATC
GCTGAGCTCG GTGTCACCTG CATTTGGCTT CTCCCGTTCT ATCCATCCAC GGGAGAGGAC
AACGGCTACA GCATCACCGA CTACTTACGC GTGGACTCCC GCTTTGGGCT GTTTCAGGAC
TTCCTCGAAT TCATTCATCG GGCCGGCGAG CACGGCATCC GCGTGGTCGT CGATCTGGTG
GTACATCATA CGTCGAACCA GCATCCCTGG TTTCAGGCCG CGCGGCACAA CGAGAAATCG
CGTTACCGCG ATTTCTATAT CTGGACCCAT AACCCGCCTC CCACACCTCC CGGCAAGGGG
ACTATTTTTC CAGGCGAGGA AGGGACTGTC TGGACCTATG ACGAGGTCGC GCGCGCCTAT
TACCACCATC GCTTCTACCA CTTCGAGCCA GGGCTCAACC ATGCAAACCC GGACGTGCGC
GACGAGATCG GCCGGATCAT AGATTACTGG CTGAGCTTCG GCGTTGCTGG TTTCCGCGTG
GATGCCGCAT CGCATATCTT GGAAAACCCG CTGGCAAAAT CCGGGGAAGA CGAGAACGCG
CCGGACATGC TGCGCGAGAT GTTCCACCGG GCCACGGGCT CGAAATCCGA CATTGTCATG
CTGGGCGAGG TGGACGAGAG CCCCAACGAG CTTGAGAGGT TCTTCGATGG CACGCGGTTG
AACATGATGT TCAACTTCCT CCTCAACAAT TATCTTATCC TCGGGCTGGC AAAGGAGAAG
GCAGAGCCGA TCCAGCGCGG CCTGGCAATG CTGCCCGTTC CCCCTGAAAA CGGCCAATGG
GCCAATTTCC TCCGCAATTT CGACGAGGCG GACCTGGAAC GACTGACGCC GGAGGAACTG
GAGAGCGTTC TTAAAATCTT CGCGCCAAAG GAAGAGATGC GAATCTATGG GCGGGGGTTG
AGGCGCAGGC TTGCCCCTAT GCTGGACGGA GACGTACGCC GCCTGAAAAT GGCAATGAGC
CTCCTCTATT CCATGCCCGG GGCGCCCGTT TTGGTTTATG GCGATGAGAT CGGCATGGGT
GAGGATCTGA CCCAAGAGGG CCGAAATTCC GTTCGCTCAC CGATGCAATG GGATGGAAGC
CGAAATGCAG GCTTCTCGTC GGCCCGCAAG GAAAGAATGG TGCAGCCGAT CATCGACAAG
GGCCGTTTTG CCTTCGAGCG GATCAATGCC GAGACACAGC GAAACGACCC GGCTTCGCTT
CTCTCTTTCG TCAAGCAGCT CGCGATCCTG CGCCGGGAGC GCACCGAGAT CGGGAGCGGC
TTCTGCGCGT TCCTGGAGTG CGGCTCCGAT CACGTGCTCG CCCACCACTA CAAATCGGAG
GCGGCTCCTC TGGTCATGGT CCACAATCTG GCAGGTGAGG CGGTGAAGAT CGACGTCAAG
TTGCCGGCTG GCGTAACCTC GCTTGGCACG CTCTTTGGCG GCGAAATGCC GTCGATCGAA
GATGGGCATT TGCGCATGAG CTTGGAACCA TACGGCGTGC GCTGGCTGGG TCTGCCGCGC
TGA
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| Protein sequence | MKDYWWKDAI VYAVDVERFC DSDGDGVGDF KGLTSKLDYI AELGVTCIWL LPFYPSTGED
NGYSITDYLR VDSRFGLFQD FLEFIHRAGE HGIRVVVDLV VHHTSNQHPW FQAARHNEKS
RYRDFYIWTH NPPPTPPGKG TIFPGEEGTV WTYDEVARAY YHHRFYHFEP GLNHANPDVR
DEIGRIIDYW LSFGVAGFRV DAASHILENP LAKSGEDENA PDMLREMFHR ATGSKSDIVM
LGEVDESPNE LERFFDGTRL NMMFNFLLNN YLILGLAKEK AEPIQRGLAM LPVPPENGQW
ANFLRNFDEA DLERLTPEEL ESVLKIFAPK EEMRIYGRGL RRRLAPMLDG DVRRLKMAMS
LLYSMPGAPV LVYGDEIGMG EDLTQEGRNS VRSPMQWDGS RNAGFSSARK ERMVQPIIDK
GRFAFERINA ETQRNDPASL LSFVKQLAIL RRERTEIGSG FCAFLECGSD HVLAHHYKSE
AAPLVMVHNL AGEAVKIDVK LPAGVTSLGT LFGGEMPSIE DGHLRMSLEP YGVRWLGLPR
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