Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_3667 |
Symbol | |
ID | 4181008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 3956497 |
End bp | 3957978 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638069560 |
Product | RNA polymerase factor sigma-54 |
Protein accession | YP_676200 |
Protein GI | 110635992 |
COG category | [K] Transcription |
COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCTTT CAACCGGCAT ACAGTTGCGG CAGTCCCAAT CGCTGGTCAT GACGCCCCAG CTGCTGCAGT CTATCCGGCT GCTGCAGCTG ACACATATCG AGTTGGAGCT GTTCATATCC GAGGAGATCG AGCGCAATCC GCTCCTCGAT CTTGTCGATG CGAGCGAGGA GGTGCCCGCA AGCGTCCTTG AGGAGAGATT TGCCTCGCCG GACAGCGCCG CGGATATTGC CGAGCGGCTG GACACCTCGC CCGAAGATCT GTTTCCAGAT GACCCGGACG TGCGGGACAC AATAGGGCCG GATCTCATGG CCCAGTGGCG CTCCGCCGCC GGAAATGGGC TCGTCGCGAC GGGCGAGGAT TGGAATCTGG AGGAGACGAC GGCCGCGCCG GCTACCTTGC GCGACCATGT TCGCGAGCAG ATCGTTCTCG CCTTTCCCGA TCCGGTCTTG AAGCTGATCG CCGAGGAGCT GCTGGATGGA CTGGACGATG CCGGCTATTT CACGGGCGAC CTGAACGAGA TCGCCGAACG CTTGGCTGCC GAGACGGTGC TGGTGGAGCG GGTGCTTTCG ATCTGCCAGA CCTTTGATCC CCCCGGCCTG TTCGCCCGCA CGCTTGCCGA ATGCCTTGCG CTGCAATTGA AGGCGCGGGA TCGTCTGGAT CCTGCCATGC AGGCGATGCT TTCGCGTCTT GATCTGCTTT CAAGGCGCGA TTTTGCTTCT TTGAAGAAAG TCTGCGGCGT GGACGAGGAG GACCTCGTGG AGATGCTGGC GGAAATCCGC TCGCTCGATC CCAAGCCCGG CACGGCCTTC TCGTCGGCAC CCGCCGAACC TGTCCTGCCG GATGTGATCG TGCGGCCCTC CGCCGGGGGA GCATGGGCGA TCGAGCTCAA TCCGGAAGTG CTGCCACGCG TGCTCGTTAA CGAGACATAT TTCACGGCCG TTTCCACGCG GGCCGGCAAA GAGGAGAAAG CCTTTCTTTC CGAGTGCCTT CAAAGTGCCA ACTGGCTGAC TCGCAGCCTG GAGCAGCGGG CAAGGACCAT CCTGAAAGTT GCCTCCGAGA TCGTGCGCCA GCAGGATGCG TTTTTCGTGA ATGGCGTTCG GCACCTGCGT CCGCTGACGC TGAAAATGGT GGCTGATGCG ATCGAAATGC ACGAATCGAC CATCAGCCGC GTCGCCACCA ACAAATACAT GATGACGCCT CGCGGTCTCT TCGAACTGCG CTACTTCTTC ACGACTGCCA TTGCCGCCGC CGACGGAGGC GATGCGCATT CGGCGGAGGC GGTGCGTGAC CGGATCCGGC AGCTTGTGGA GGCGGAAGAC CCCAACGAAG TGCTTTCCGA CGATACGATT GTCGAGGTTC TGCGAAAGGA CGGAATTGAT ATCGCCCGCA GGACGATAGC AAAATACCGG GAGGCGATGA ACATCCCGTC GTCGGTTCAG CGCAGGCGCG AGAAGAGGGT GCTCGCCCGA GCCGGCGCAT GA
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Protein sequence | MALSTGIQLR QSQSLVMTPQ LLQSIRLLQL THIELELFIS EEIERNPLLD LVDASEEVPA SVLEERFASP DSAADIAERL DTSPEDLFPD DPDVRDTIGP DLMAQWRSAA GNGLVATGED WNLEETTAAP ATLRDHVREQ IVLAFPDPVL KLIAEELLDG LDDAGYFTGD LNEIAERLAA ETVLVERVLS ICQTFDPPGL FARTLAECLA LQLKARDRLD PAMQAMLSRL DLLSRRDFAS LKKVCGVDEE DLVEMLAEIR SLDPKPGTAF SSAPAEPVLP DVIVRPSAGG AWAIELNPEV LPRVLVNETY FTAVSTRAGK EEKAFLSECL QSANWLTRSL EQRARTILKV ASEIVRQQDA FFVNGVRHLR PLTLKMVADA IEMHESTISR VATNKYMMTP RGLFELRYFF TTAIAAADGG DAHSAEAVRD RIRQLVEAED PNEVLSDDTI VEVLRKDGID IARRTIAKYR EAMNIPSSVQ RRREKRVLAR AGA
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