Gene Meso_3666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3666 
Symbol 
ID4181007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand- 
Start bp3955704 
End bp3956264 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content58% 
IMG OID638069559 
Productsigma 54 modulation protein / SSU ribosomal protein S30P 
Protein accessionYP_676199 
Protein GI110635991 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1544] Ribosome-associated protein Y (PSrp-1) 
TIGRFAM ID[TIGR00741] ribosomal subunit interface protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.519395 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCCTCC GCATTTCTGG CAAACATATG GACATCGGCG CGGCGTTTCG CACACGGATC 
GAAAGCCGGA TCGTCGAAGC GATGGAGAAA TATTTCGACG GCGGTTTTTC AGGGCGTGTG 
GCGGTGGAAA AATCGCGCGG ACGCTTCACC GCCGACTGCT CTGTCCACCT CGATACGGGC 
GTGGTCCTGC AGTCCACAGG CGAGGCCCAC GATCCTCAAC TCGCCTTTGG GACAGCTGCC 
GAGCGCATAG AGAAGCAGCT TAGGAGATAC AAGCGAAAGC TGAAATCGCA TGCGGCCGGC 
CAGAATGGGA ACGGCCGTTT GGCAGAAGAT CGGGTGGTGG AACCGGCCCA GGAAGATCGG 
GAGGATTTCG CCGATGATCT TGCACCGGCG GTGGCTGCCG AATTCCTCGC GCCGTTCAAA 
GCCTCCGCTG CAATGGAACT AGATATGAAG GACAGCCCTG TTTTTGTTTT CCGCATTTCA 
GGCAGCAATG CCGGGAAAAC CGTCTATCGG CGTGCCGATG GCAATATCGG ATGGATCGAT 
CCTTCCGCTA CAAACGGATA G
 
Protein sequence
MGLRISGKHM DIGAAFRTRI ESRIVEAMEK YFDGGFSGRV AVEKSRGRFT ADCSVHLDTG 
VVLQSTGEAH DPQLAFGTAA ERIEKQLRRY KRKLKSHAAG QNGNGRLAED RVVEPAQEDR 
EDFADDLAPA VAAEFLAPFK ASAAMELDMK DSPVFVFRIS GSNAGKTVYR RADGNIGWID 
PSATNG