| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3657 |
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| Symbol | deoA |
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| ID | 4179534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | + |
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| Start bp | 3948455 |
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| End bp | 3949771 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638069550 |
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| Product | thymidine phosphorylase |
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| Protein accession | YP_676190 |
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| Protein GI | 110635982 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02643] thymidine phosphorylase
[TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCTCC CCCAGGAAAT CATCCGCAGG AAACGCGACG GCAAGGCTCT GTCGCCGGCC
GATATCGCTG ATTTTGCGGC CGGTCTTGCC TCCGGCGCCT GGAGCGAAGG GCAGGTGGCC
GCCCTCGCCA TGGCGGTCCT GCTCAACGGC ATGGAGCGCG ATGAAACCGT CGCGCTCACT
CTTGCAATGC GCGATTCCGG CGACGTGCTC GACTGGTTGT CACTTCCCGC CCCGGTCACC
GACAAGCATT CCACGGGCGG CGTGGGCGAT AATGTCTCGC TGATGCTGGC GCCCATCGTC
GCCGCCTGCG GCGCCTATGT GCCCATGATA TCGGGGCGCG GGCTCGGGCA TACGGGCGGC
ACGCTCGACA AGATGGACTC CATTCCCGGC TATCGCAGCC AGCCGACGCG GGAAGAGTTC
GAGCGAACCG TGCGCGCCGC CGGCTGCGCC ATCATCGGCC AGACGGGAGA CCTTGCGCCC
GCGGACCGCC GCTTCTACGC CATCAGAGAC GTGACCGGCA CGGTGGAATC CATCCCTCTC
ATCACGGCGT CGATTCTTTC CAAAAAACTT GCCGCCGGCC TGCAGTCGTT GGTCCTCGAC
GTAAAATCGG GCAACGGCGC CTTCATGGCC GAGAGGAGCG AGGCTCAGGC GCTCGCGACC
AGCCTCGTGC AGGTGGCGCA GGGCGCGGGG CTATCTGCCA GCGCGCTTAT CACGGACATG
AACGAGCCGC TCGCCACGGC CGCGGGCAAT GCTGTCGAGG TGCGAAACGC CGTCGATTTT
CTCACGGGAG AAACACGGGA TGAGCGCCTT GAGGAGGTGA CGCTGGCGCT GGCGGCCGAG
ATGCTCGTAG CCACGGGCAT CGCATCCGGT GGGGAGAATG CGTTGAAACG CGCCCGCACG
GCGCTCGAAA GCGGCGGTGC GGCCGAGCGC TTTAGCCGGA TGGTCGCCGC GCTTGGCGGC
CCCGCCGATT TCGTTGAGAA GATGGACCAA TATCTCCCTC GCGCGCCCGA AACGCGTGCT
GTGAAAGCCG AGCGGGCGGG ATTCGTCGCC AGCATAGACA CGCGGGCGCT GGGAATTGTC
GTGGTCGAAC TCGGCGGCGG CCGGCGCAGG CCGGAAGATC CAATCGACCA CGCCGTCGGC
CTCACAGCCA CATTGCCCAT CGGCAGGGAA GTCCGCCGCG ACGATCCGCT GGCCGTGGTC
CATGCCCGCA CGCCCGCCGA TGCCGAACGG GCAGCCGAAG CGGTCCGCCG CGCCTACCGC
ATCGCCGATG AGCGGCTTTC CACGCAATCG CCTGTGCTGG AGAAGATCGC GGGCTGA
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| Protein sequence | MPLPQEIIRR KRDGKALSPA DIADFAAGLA SGAWSEGQVA ALAMAVLLNG MERDETVALT
LAMRDSGDVL DWLSLPAPVT DKHSTGGVGD NVSLMLAPIV AACGAYVPMI SGRGLGHTGG
TLDKMDSIPG YRSQPTREEF ERTVRAAGCA IIGQTGDLAP ADRRFYAIRD VTGTVESIPL
ITASILSKKL AAGLQSLVLD VKSGNGAFMA ERSEAQALAT SLVQVAQGAG LSASALITDM
NEPLATAAGN AVEVRNAVDF LTGETRDERL EEVTLALAAE MLVATGIASG GENALKRART
ALESGGAAER FSRMVAALGG PADFVEKMDQ YLPRAPETRA VKAERAGFVA SIDTRALGIV
VVELGGGRRR PEDPIDHAVG LTATLPIGRE VRRDDPLAVV HARTPADAER AAEAVRRAYR
IADERLSTQS PVLEKIAG
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