| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3654 |
|---|
| Symbol | |
|---|
| ID | 4179531 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | + |
|---|
| Start bp | 3946281 |
|---|
| End bp | 3947252 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638069547 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_676187 |
|---|
| Protein GI | 110635979 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.119875 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTCT TTAGCACGCT TGTCTTCCTG CTCGATTCCA CCATCCGCGT CTCGGTGCCG
CTGCTTCTAG CCGCGCTCGC CGGCCTTTAT TCGGAACGTT CCGGCGTTTT CGATATAGGG
CTCGAAGGCA AGATGCTCGG GGGCGCCTTC GCCGCCGGGG CGGCGGCTGC CGTCACGGGA
TCCCCCTGGA TCGGCCTTTC CGCAGCCGTA GCAATCGCCG TCTTCCTCTC GCTCGTCCAC
GGCTTTGCCT CCATCACCCA TCGCGGCAAC CAGATCGTCT CGGGCGTGGC GATCAACTTC
ATCGCCGCAG GCTCCACCAT CATTCTCGGC CAGGCCTGGT TCAGCCAGGG TGGGCGCACG
CCGCTGCTCG GCGGCGATGC ACGTTTCGGC GCAATCCAGC TCCCCTTCGC GGGGTCGCTG
AGCGATGTGC CGATCATCGG CGAACTCTAT TCGGACCTGC TCTCCGGTCA CTCCCTTATC
GTCTACATTG CCTTCCTGCT GGTGCCTTTC ACCTGGTGGG TGCTCTTCCG CACCCGCTTC
GGTCTGAGGC TCAGGGCGGT CGGCGAGAAC CCTGCCGCAG TGGATACCGC CGGCATCTCC
GTCGCGTGGC TGCGCTATCG CGCGCTCATC TGCACCGGGA TTCTTACCGG TCTTGCCGGC
ACCTATCTGG CGCTTTCCCA GAATGCAGGC TTCGTGAAGG ACATGACCGC CGGCCGCGGC
TATATTGCCC TGGCAGCCCT CATCTTCGCC AAATGGCGGC CCGTCCCGGT GATGTTCGCC
TGCCTGCTCT TCGGCTTTCT CGATGCTTTC GCCATTCGCA TTCAGGGCAC GGCCTTGCCG
CTCCTTGGGC AGCTCCCGGT GCAGTTCATG CAGGCCCTGC CGTATATCCT CACCGTCATC
CTGCTTGCGG GCTTCATCGG CAGAGCCGAG CCACCGCGCG CCGGCGGAAT ACCCTATGTG
AAGGAGCGTT GA
|
|---|
| Protein sequence | MDFFSTLVFL LDSTIRVSVP LLLAALAGLY SERSGVFDIG LEGKMLGGAF AAGAAAAVTG
SPWIGLSAAV AIAVFLSLVH GFASITHRGN QIVSGVAINF IAAGSTIILG QAWFSQGGRT
PLLGGDARFG AIQLPFAGSL SDVPIIGELY SDLLSGHSLI VYIAFLLVPF TWWVLFRTRF
GLRLRAVGEN PAAVDTAGIS VAWLRYRALI CTGILTGLAG TYLALSQNAG FVKDMTAGRG
YIALAALIFA KWRPVPVMFA CLLFGFLDAF AIRIQGTALP LLGQLPVQFM QALPYILTVI
LLAGFIGRAE PPRAGGIPYV KER
|
|---|
| |