| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3624 |
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| Symbol | |
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| ID | 4181221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 3910808 |
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| End bp | 3912919 |
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| Gene Length | 2112 bp |
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| Protein Length | 703 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638069518 |
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| Product | TRAP transporter, 4TM/12TM fusion protein |
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| Protein accession | YP_676158 |
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| Protein GI | 110635950 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCTGGCG ACACCGAGCA CAAATTTATC GACGCTGCGG TCGAAGATGC CGAGAAGTTC
GATTTCGGCT CAAAGCACAG AAATTTAAAC GGCTGGCAGA AAGCTACGAT CGGCGCGCTG
TGCGTGCTTT ATGCGGTGTT CCACCTCATG GTGCTGAACT TCGTGCAGCT CGATGCCTGG
GTCTTCCGCG CGGTCCACGT CAATATCGCC GCGGTCATCG CTTTCGCCAT GTATGCGCCC
TTCGGTCGGC CGGGCGAAAA AGTCCCCGCG ATGGACATGC TGCTCTCCGT CGTCGCGATC
GTAGCCACGG GCTATATCTG GTGGAACCTC AACGCGCTGA TCCTGCGCAC CGGGGTCCTG
ATGACCACCA CCGACGTCCT GGTAGCCACG GCCGGCATCG TCGTGGTCAT TGAGTTCACC
CGCCGCACCT CCGGCCTCGC GCTGCCGATC CTCGCCGGAA TCTTTATCCT ATACGGCTTC
GTCGGGCCGT GGCTTCCGGG AGTCCTGTTT CATCGGGGAT ACAGCTTCGG CGAGTTCACG
ACCTTCGTTT ACTCGATGGA AGGCATCTTT GGCATCACCA CCGCCGCCGC GGCACTCTAT
ATCGTTCTCT TCGTGCTGTT CGCCGCCTTC CTCCAGGTTT CCAAGGTCGG CGACTTTTTC
ATGAACCTGG CCTTCGGCGC CTTCGGCTGG CTGCGCGGCG GCCCGGCCAA GGTCTCGCTG
TTCGGTTCAA TTCTCTTCGG CATGATCTCC GGCTCGGGTG TGGCCAACGT CGTCGCGTCC
GGAACCTTCA CCATCCCCGT CATGAAGCGG GTGGGGTACA AGCCGTCGAG CGCAGGCGCG
ATCGAGGCTG CGGCCTCAAC GGGCGGGCAA CTCACGCCAC CGATCATGGG TGCCGGCGCA
TTTATCATGG CGGAAGTAAC GGGTATTCCC TACACCACGA TCATCGTCGC GGCTCTCATA
CCCTGCCTCC TCTATTATTT CGCCGTCTAC GTGCACATCG ATCTGGAAGC GCGCAAGGAA
GGCATCGAGG GCCTGCCCCG CGCAGACCTG CCGCCGCTGA AGCCGATGAT GCGCGACGCC
TTCGTGCTTG CTCCTCTCGC AGTGCTTCTC ATCTTTCTCT TTGCCGGTTT CTCGATCATT
TCGGCCGGCT CCTGGGGCAT TGCGATCTCC GTTCTTGTGA TGCTGCAGCA ACGACTCGGC
ATCGACACGC GGGTTCACGC CGCGCCGATC CTGTGTGCGC TGGCGACGGT CGTGCTTCTG
CCCGGCGTGC CTGCCAGCAC GCATGGCGGC ATCGCCTTTG CGGTCGGTCT CATCGCCATC
CTGGCGGCCG CGATCGTCGG GCGGCATGCC GCACTGGCCG ATGCGCTGAA AGGAACGGGC
GTTGATATTC TCGAGGCGCT TTCCATCGGC ACGCGCCAAT CGCTTCAATT GGCAGCCGTC
TGCGCATGTG CCGGCATCGT CGTTGGCGTG ATCGGTCTGA CCGGGCTTGG CGGGCGGTTT
TCGGCGCTGC TTTTGGGCGT TGCCGGCCAG AGCGAAATGC TGGCGCTCGC CTTCGCCATG
ATCATCGCCC TGATCCTCGG CATGGGTATG CCGACCACCG CAGCCTACGC CATCGCAGCC
AGCGTGGTCG CGCCCGCCTT GCAGCGCATG GGGCTGCCAG TGCTGCCGGT GCATCTCTTT
ATCTTCTACT ACGCGGTGAT TTCGACGATC ACGCCGCCGA TCGCGCTTTC CGCCTTCGCG
GGTGCTGCGC TGGCGGGCGC CGATCCATGG AAGACGGCGT TCAAGTCGGT GCGCTACGGC
ATCGCCGCCT TCATCGTCCC GTTTCTGTTC ATCCACAATC AGGGCATCCT GTTGGAAGGC
AGCGTCATCG ACATCGTCAG GACGACGTTG ACCGCGCTCA TCGGGATCTG GGGCATCGCA
ACCGCCTCGG AAGGTTGGTT TGCCGGTCGT CTTTCGGCAT TCCTGCGGAT TGCCCTTGCA
GCGGCGGCCC TGCTGCTCAT CGCCGGCGAC ATTTACACCG ACATCGCCGG CCTAGTCCTG
ATCGCGGCAT TCGTCGCCTA CAGGACGCTT CGCGCACGTT CGCGCGCAGT TCACCACCCA
TCCGGAATTT GA
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| Protein sequence | MSGDTEHKFI DAAVEDAEKF DFGSKHRNLN GWQKATIGAL CVLYAVFHLM VLNFVQLDAW
VFRAVHVNIA AVIAFAMYAP FGRPGEKVPA MDMLLSVVAI VATGYIWWNL NALILRTGVL
MTTTDVLVAT AGIVVVIEFT RRTSGLALPI LAGIFILYGF VGPWLPGVLF HRGYSFGEFT
TFVYSMEGIF GITTAAAALY IVLFVLFAAF LQVSKVGDFF MNLAFGAFGW LRGGPAKVSL
FGSILFGMIS GSGVANVVAS GTFTIPVMKR VGYKPSSAGA IEAAASTGGQ LTPPIMGAGA
FIMAEVTGIP YTTIIVAALI PCLLYYFAVY VHIDLEARKE GIEGLPRADL PPLKPMMRDA
FVLAPLAVLL IFLFAGFSII SAGSWGIAIS VLVMLQQRLG IDTRVHAAPI LCALATVVLL
PGVPASTHGG IAFAVGLIAI LAAAIVGRHA ALADALKGTG VDILEALSIG TRQSLQLAAV
CACAGIVVGV IGLTGLGGRF SALLLGVAGQ SEMLALAFAM IIALILGMGM PTTAAYAIAA
SVVAPALQRM GLPVLPVHLF IFYYAVISTI TPPIALSAFA GAALAGADPW KTAFKSVRYG
IAAFIVPFLF IHNQGILLEG SVIDIVRTTL TALIGIWGIA TASEGWFAGR LSAFLRIALA
AAALLLIAGD IYTDIAGLVL IAAFVAYRTL RARSRAVHHP SGI
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