Gene Meso_3623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3623 
Symbol 
ID4181220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp3909803 
End bp3910792 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content63% 
IMG OID638069517 
ProductTRAP transporter solute receptor TAXI family protein 
Protein accessionYP_676157 
Protein GI110635949 
COG category[R] General function prediction only 
COG ID[COG2358] TRAP-type uncharacterized transport system, periplasmic component 
TIGRFAM ID[TIGR02122] TRAP transporter solute receptor, TAXI family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.410742 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAGAT CGATTATCTG CATACTCGGT ATGGCGGCGA TCCTGCCGGC CTCGGCCCAG 
GAGGCCGACC GGAGCGACTG GCCCAACACC GTGGTGATCG GAACCGCGTC GCCCGGCGGC
ACCCATGCGA TCTACGGCCA GGGTGTGGCC AGCATCATCT CCAACCATGT CGGCGTGTCG
GCTTCCACGC AGCAGACGCA GGGTCCGACG CAAAACCTCG TGCTGGTCCA TTCCGACCGC
ATCAATGTCG GCCTGACCAC CATGGGGCCC GCTTATGAGG CCATGCAGGG CGAACTGGAT
CTCGATCCAG GCACCGAATA CAGCGACGTC CGCGCTTTGT TTCCCATGTA TATCACACCG
TTCCAGGCCG CGGCGCTTGA GCGCAGCGGG ATTAGCTCAG TTTCCGATCT GGCTGGTCGC
ACCATCGGTG CCGGTCCGCG AGGCGGCACC GGCGGCACGT ACTGGGCCCG CTGGCTCGAG
ACGCTAGGCG TCGACGCCTC CATCCAGAAC GGCCCGCTGG GCGACCAAAC CTCGCAGCTC
GCCGACGGCC GGCTTGATGC CGTGACCACC GCGGCAGGGT TGCCTATCGC GGCGTTCTCC
GAGCTCGAGA CGCTGGCGCC GACCGTCTTC TTCGGTCTGT CGCAGGAAGA GATCGATACG
CTTCGCGATA CGGTCCCCTA TGCGGTCGAA TTCACAATCC CTGCGAACAC ATACAGCTCT
CAGCCGGAAG ACATCCAAAC GCTGGCGATG TGGAACGTGG CTTTCACCAA CGAACGTATG
CCCGAATCGC TCGCCTACGA GATCGTGAAG GCCGTATTCG AAAATCAGGA AGAGCTGGTC
GCCACGCACG CGTCGGCCAA GGAGACGCTG CTCGAGAACG TCGCCGCCGC GAACGACTTC
ATGCCCTATC ACCCAGGTGC CGTACGCTAC TACCGCGAGC AGGGGATCGA GCTCCCCGAA
GCAGTCATCC CCGCTGAAAT GGCTGAATGA
 
Protein sequence
MIRSIICILG MAAILPASAQ EADRSDWPNT VVIGTASPGG THAIYGQGVA SIISNHVGVS 
ASTQQTQGPT QNLVLVHSDR INVGLTTMGP AYEAMQGELD LDPGTEYSDV RALFPMYITP
FQAAALERSG ISSVSDLAGR TIGAGPRGGT GGTYWARWLE TLGVDASIQN GPLGDQTSQL
ADGRLDAVTT AAGLPIAAFS ELETLAPTVF FGLSQEEIDT LRDTVPYAVE FTIPANTYSS
QPEDIQTLAM WNVAFTNERM PESLAYEIVK AVFENQEELV ATHASAKETL LENVAAANDF
MPYHPGAVRY YREQGIELPE AVIPAEMAE