Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_3623 |
Symbol | |
ID | 4181220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 3909803 |
End bp | 3910792 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638069517 |
Product | TRAP transporter solute receptor TAXI family protein |
Protein accession | YP_676157 |
Protein GI | 110635949 |
COG category | [R] General function prediction only |
COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.410742 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAGAT CGATTATCTG CATACTCGGT ATGGCGGCGA TCCTGCCGGC CTCGGCCCAG GAGGCCGACC GGAGCGACTG GCCCAACACC GTGGTGATCG GAACCGCGTC GCCCGGCGGC ACCCATGCGA TCTACGGCCA GGGTGTGGCC AGCATCATCT CCAACCATGT CGGCGTGTCG GCTTCCACGC AGCAGACGCA GGGTCCGACG CAAAACCTCG TGCTGGTCCA TTCCGACCGC ATCAATGTCG GCCTGACCAC CATGGGGCCC GCTTATGAGG CCATGCAGGG CGAACTGGAT CTCGATCCAG GCACCGAATA CAGCGACGTC CGCGCTTTGT TTCCCATGTA TATCACACCG TTCCAGGCCG CGGCGCTTGA GCGCAGCGGG ATTAGCTCAG TTTCCGATCT GGCTGGTCGC ACCATCGGTG CCGGTCCGCG AGGCGGCACC GGCGGCACGT ACTGGGCCCG CTGGCTCGAG ACGCTAGGCG TCGACGCCTC CATCCAGAAC GGCCCGCTGG GCGACCAAAC CTCGCAGCTC GCCGACGGCC GGCTTGATGC CGTGACCACC GCGGCAGGGT TGCCTATCGC GGCGTTCTCC GAGCTCGAGA CGCTGGCGCC GACCGTCTTC TTCGGTCTGT CGCAGGAAGA GATCGATACG CTTCGCGATA CGGTCCCCTA TGCGGTCGAA TTCACAATCC CTGCGAACAC ATACAGCTCT CAGCCGGAAG ACATCCAAAC GCTGGCGATG TGGAACGTGG CTTTCACCAA CGAACGTATG CCCGAATCGC TCGCCTACGA GATCGTGAAG GCCGTATTCG AAAATCAGGA AGAGCTGGTC GCCACGCACG CGTCGGCCAA GGAGACGCTG CTCGAGAACG TCGCCGCCGC GAACGACTTC ATGCCCTATC ACCCAGGTGC CGTACGCTAC TACCGCGAGC AGGGGATCGA GCTCCCCGAA GCAGTCATCC CCGCTGAAAT GGCTGAATGA
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Protein sequence | MIRSIICILG MAAILPASAQ EADRSDWPNT VVIGTASPGG THAIYGQGVA SIISNHVGVS ASTQQTQGPT QNLVLVHSDR INVGLTTMGP AYEAMQGELD LDPGTEYSDV RALFPMYITP FQAAALERSG ISSVSDLAGR TIGAGPRGGT GGTYWARWLE TLGVDASIQN GPLGDQTSQL ADGRLDAVTT AAGLPIAAFS ELETLAPTVF FGLSQEEIDT LRDTVPYAVE FTIPANTYSS QPEDIQTLAM WNVAFTNERM PESLAYEIVK AVFENQEELV ATHASAKETL LENVAAANDF MPYHPGAVRY YREQGIELPE AVIPAEMAE
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