| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3606 |
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| Symbol | rpsA |
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| ID | 4181203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 3889257 |
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| End bp | 3890966 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638069499 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_676140 |
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| Protein GI | 110635932 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000377018 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACAAT TCAATCCGTC TCGCGATGAT TTCGCGAGCC TTCTCGACGA ATCCTTTTCC
GGGCGCGATG CGGTCGAGGG TTCGGTCGTC AAGGGCATCA TCACCGCAAT CGAAAAGGAC
ATGGCAATCA TCGACGTCGG CCTGAAGGTC GAAGGCCGTG TCCCGCTCAA GGAATTTGGC
GCCAGGGCCA AGGATGGCCA GCTGAAGCCG GGCGACGAGG TCGAGGTGTA TGTCGAGCGC
ATCGAGAATG CGCTGGGCGA GGCCATGCTG TCGCGCGAGA AGGCTCGCCG CGAGGAAAGC
TGGACCAAGC TTGAAGAGAA ATTCAACAAG GGTGAGCGCG TCGAAGGCGT CATCTTCAAC
CAGGTCAAGG GCGGCTTCAC GGTCGATCTC GACGGCGCCG TCGCGTTCCT GCCGCGCAGC
CAAGTGGACA TCCGGCCGAT CCGCGACGTC TCCCCGCTCA TGCACACGCC GCAGCCTTTC
GAAATCCTCA AGATGGACAA GCGGCGCGGC AACATCGTCG TCTCCCGCCG CACCGTGCTG
GAGGAAAGCC GCGCCGAGCA GCGCTCGGAG ATCGTGCAGA ACCTCGAAGA GGGCCAGGTG
GTCGAGGGTG TCGTCAAGAA CATCACCGAT TACGGCGCGT TCGTGGACCT GGGCGGCATC
GACGGCCTCC TGCACGTCAC CGATATGGCC TGGAGGCGCG TCAACCATCC GACCGAGATC
CTCAATATCG GCCAGACGGT GAAGGTGCAG ATCATCCGCA TCAACCAGGA GACGCACCGC
ATTTCGCTCG GCATGAAGCA GCTCGAGTCC GACCCGTGGG AAGGCATCGG CGGCAAGTAT
CCGCTGGGCA AGAAAGTGCA GGGCCGCGTC ACGAACATCA CCGACTACGG CGCCTTCGTG
GAACTGGAGC CTGGCATCGA GGGCCTCATT CACGTCTCCG AGATGTCCTG GACCAAGAAG
AACGTGCATC CCGGCAAGAT CCTGTCCACG ACGCAGGAGG TCGAGGTGGT CGTGCTCGAG
GTCGATCCGG TCAAGCGCCG TATTTCACTG GGCCTCAAGC AAACGCTGGA GAACCCGTGG
GAAGCCTTTG CCCGCAATCA CCCGGTTGGC TCGGTGGTCG AGGGCGAGGT CAAGAACAAA
ACCGAGTTCG GTCTGTTCAT CGGCCTCGAA GGCGACGTGG ACGGCATGGT CCATCTCTCG
GATCTCGACT GGTCGCGCCC CGGCGAGCAG GTAATCGAGG AATACAACCG CGGCGACATG
GTCAAGGCGC AGGTCCTCGA TGTGGATATC GAGAAGGAGC GTATCTCCCT CGGTATCAAG
CAGCTCGGGC GTGATGTGGT CGGCGAGGCT GTTGCGTCCG GCGAACTGCG CAAGAACGCG
GTGGTCACCT GCGAGGTGAT CGGCGTGAGA GATGCCGGTC TCGACGTGCG CCTGGTCGAC
CATGACATCG AGAGCTTCAT CAAGCGCTCC GACCTTTCCC GCGATCGCGA CGAGCAGCGC
CCCGAGCGTT TCGCCGTGGG CCAGAAGGTG GACGCCCGCG TGACCCAGTT CGACAAGAAG
TCACGCAAGC TCAGCGTGTC CATCAAGGCA CTGGAGATCG CCGAGGAGAA GGAAGCAGTC
GCCCAGTACG GCTCGACCGA TTCCGGAGCC TCGCTCGGCG ACATTCTGGG CGCAGCGCTC
AAGAAGCAGA GCGGCGGCAA AGAGGAATAG
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| Protein sequence | MSQFNPSRDD FASLLDESFS GRDAVEGSVV KGIITAIEKD MAIIDVGLKV EGRVPLKEFG
ARAKDGQLKP GDEVEVYVER IENALGEAML SREKARREES WTKLEEKFNK GERVEGVIFN
QVKGGFTVDL DGAVAFLPRS QVDIRPIRDV SPLMHTPQPF EILKMDKRRG NIVVSRRTVL
EESRAEQRSE IVQNLEEGQV VEGVVKNITD YGAFVDLGGI DGLLHVTDMA WRRVNHPTEI
LNIGQTVKVQ IIRINQETHR ISLGMKQLES DPWEGIGGKY PLGKKVQGRV TNITDYGAFV
ELEPGIEGLI HVSEMSWTKK NVHPGKILST TQEVEVVVLE VDPVKRRISL GLKQTLENPW
EAFARNHPVG SVVEGEVKNK TEFGLFIGLE GDVDGMVHLS DLDWSRPGEQ VIEEYNRGDM
VKAQVLDVDI EKERISLGIK QLGRDVVGEA VASGELRKNA VVTCEVIGVR DAGLDVRLVD
HDIESFIKRS DLSRDRDEQR PERFAVGQKV DARVTQFDKK SRKLSVSIKA LEIAEEKEAV
AQYGSTDSGA SLGDILGAAL KKQSGGKEE
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