| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3605 |
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| Symbol | |
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| ID | 4182204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 3887155 |
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| End bp | 3889098 |
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| Gene Length | 1944 bp |
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| Protein Length | 647 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638069498 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_676139 |
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| Protein GI | 110635931 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.184657 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGGATA AAAAGCAAAG CCCAGCGCCC TTGCGGCCGG AAGTCTTGAA GCTCAGAATC
CGAGCCGACC AACTCAACGA CATCCGCCGT GGCATTTTCT TTTCGAACCC GATCAGCAGC
CTCCTCTCCG CCCTGATCCT TGCGGCACAT GTTGCGGCCG GTCATGCCTT TGTTGCCGTA
CTGGTGTGGT TCCTCGCCAT TAACGCCATC AATGGCGCGC GGATTATATG CGCGTTCAGG
CAATCACGAA TTTCCAAGCA GGGGTGTGAA GATCTGTCCA AGGTCATGGC GCATCTTGGT
CAGTTCAAGC TCCTCGCTTT TTTGTCCGGC ATCAATTGGG CTTTTCTGGC CCTGCTGACT
GAGGGATATA CAACCCCCAA ATCAGAGCTC GATCTGATTA TTCTGGCGGG AGTATCCGCC
GGAGCTGTGG TGTATGGCGC TCCATACGCG GTGATTTCAA TCAGCTTCAT GCTGCCGCCG
TTGCTCGTCG TCATCGCATG CTTCCTCTAC CAAGGTGGCT TCGAAAGCTA CCTGATGGTT
CTTGCAGTGG CACTCTTCAT CGCCGGATTG ATCCGTGGCG CAATGGTGGG CCAGGCCCGG
TTCCTGGAAG GAAGCCGCCT CAAGCACGAG GCAAGGCAGA TCGCGGCCGA GATGGAGCAA
AGCTCGCGCG AGGATCCCTT AAGCGGCCTT CTAAACAGGC GTGGCCTCGA ACACGCGATA
GAGGGGCTTG CCGAAACCGA TGGTCCGTTT GTAACGATGC TTATCGATCT CGACGGCTTC
AAGTCCGTCA ACGATACTTA CGGCCACAAA ATTGGAGACG ATCTGCTTGT CAGGATCGCG
CATCGGGTGG GCGAGAGCGC TCCGCCGGGG GCGATCCTGT CGCGCATCGG CGGAGATGAA
TTCGTCCTGC TCTACCCCGA GCGCGCAGCG CCGCATCCCC CTGGCCAGCT TGCGCTGGAT
CTCATCGCGG CCATCGCGAG CCCCTATTTT CTCGTCGCTT CCGTTCGCAT CGGCGCGTGC
ATAGGCATTT ATCGTTCGCA GAAGCCGAGT CTCACCGAAA TGCTGCTCCG GGCCGACATC
GCGCTTTATG CTGCGAAGGG ACGCGGGCGG AATGAATTTT GCGAGTTCGA CGAAAACCTG
CAGCAGGAGC TTGAGCGCCG CCAGTGCATC GAACGGGATC TCATTATCGC GATCGAGCAA
GGAGAGCTCG GCATCTGGTT TCAGCCAATC GTCACGCTGA AGACGGCAGA GATTGTCGGC
TTTGAAGCGT TGCTGCGCTG GCGCCATCCC ACCCATGGTG AAATTTCCCC GCCCGAGATT
GTGGATGCCG CGCGGGAGAC GGGCCTGCTC TTCCAACTTA CCGAGACGGT GTTCCGCAAC
TGCTGTGTCA TGATGGAGCT GCTGAAAAAG GCAGGGCGCA GCGACATTCG CGTGGCAATG
AATTTCTCGC CGCGCGAACT GGAAAACAGC AGCGTCGATG AAATGATCAT GACCGGGCTG
ACGGAAAGAG ACCTTCCCGT TTCGATGTTT GAAATCGAGA TCACCGAGGA AGCGGCCTTG
GATCGCTATC GCGTGCACGA GCGGCTGGGC CGCCTCTCCG GCTTCGGCAT ATCCATCGCG
CTCGACGATT TCGGTACCGG CTTCTCCACG CTGGCCTCGC TGAAGGACAT ACGAATCCGC
AAGGTGAAGA TCGACAAGGA GTTCATTTGC GGCATCGCGA AATCCCGGGA TGACCAGCTT
CTTGTCAAAG CGGTGATCGA CCTTGGCCGA GCTTTCGACA TCGAAGTCAT GGCGGAAGGG
GTGGAAACTG AGGAAGACCG CCGGGTCCTA CAGGTTCTCG GCTGCTGTAC CGCGCAAGGG
TTTCTGTTTG CACGCGCTCT GCCCATCAAT GAGGCTGTCG AGATGGCGCT CGGAAAGGCC
GCCGCTGGTA AAGGAAGCGG TTGA
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| Protein sequence | MGDKKQSPAP LRPEVLKLRI RADQLNDIRR GIFFSNPISS LLSALILAAH VAAGHAFVAV
LVWFLAINAI NGARIICAFR QSRISKQGCE DLSKVMAHLG QFKLLAFLSG INWAFLALLT
EGYTTPKSEL DLIILAGVSA GAVVYGAPYA VISISFMLPP LLVVIACFLY QGGFESYLMV
LAVALFIAGL IRGAMVGQAR FLEGSRLKHE ARQIAAEMEQ SSREDPLSGL LNRRGLEHAI
EGLAETDGPF VTMLIDLDGF KSVNDTYGHK IGDDLLVRIA HRVGESAPPG AILSRIGGDE
FVLLYPERAA PHPPGQLALD LIAAIASPYF LVASVRIGAC IGIYRSQKPS LTEMLLRADI
ALYAAKGRGR NEFCEFDENL QQELERRQCI ERDLIIAIEQ GELGIWFQPI VTLKTAEIVG
FEALLRWRHP THGEISPPEI VDAARETGLL FQLTETVFRN CCVMMELLKK AGRSDIRVAM
NFSPRELENS SVDEMIMTGL TERDLPVSMF EIEITEEAAL DRYRVHERLG RLSGFGISIA
LDDFGTGFST LASLKDIRIR KVKIDKEFIC GIAKSRDDQL LVKAVIDLGR AFDIEVMAEG
VETEEDRRVL QVLGCCTAQG FLFARALPIN EAVEMALGKA AAGKGSG
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